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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 351-400 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2630 178_001_scaffold_2630
Species: Clostridium perfringens (100%)
2 1788 bp 29.19 7.89 91.78
NECEvent2014_8_1_scaffold_3155 178_001_scaffold_3155
Species: Clostridium perfringens (100%)
1 1483 bp 32.23 7.89 96.90
NECEvent2014_8_1_scaffold_2680 178_001_scaffold_2680
Species: Clostridium perfringens (100%)
1 1756 bp 29.84 7.86 73.80
NECEvent2014_8_1_scaffold_2744 178_001_scaffold_2744
Species: Clostridium perfringens (100%)
1 1718 bp 30.97 7.86 85.22
NECEvent2014_8_1_scaffold_1487 178_001_scaffold_1487
Genus: Clostridium (100%)
5 3208 bp 26.75 7.86 95.95
NECEvent2014_8_1_scaffold_1493 178_001_scaffold_1493
Species: Clostridium perfringens (100%)
2 3197 bp 30.18 7.84 99.00
NECEvent2014_8_1_scaffold_4321 178_001_scaffold_4321
Species: Clostridium perfringens (100%)
2 1073 bp 30.48 7.83 85.55
NECEvent2014_8_1_scaffold_1912 178_001_scaffold_1912
Species: Clostridium perfringens (100%)
3 2493 bp 31.57 7.82 98.68
NECEvent2014_8_1_scaffold_3779 178_001_scaffold_3779
Species: Clostridium perfringens (100%)
2 1229 bp 31.16 7.81 98.62
NECEvent2014_8_1_scaffold_2090 178_001_scaffold_2090
Species: Clostridium perfringens (100%)
1 2276 bp 30.98 7.78 87.39
NECEvent2014_8_1_scaffold_1383 178_001_scaffold_1383
Species: Clostridium perfringens (83.33%)
6 3471 bp 28.06 7.78 97.49
NECEvent2014_8_1_scaffold_2707 178_001_scaffold_2707
Species: Clostridium perfringens (100%)
2 1741 bp 29.70 7.75 88.23
NECEvent2014_8_1_scaffold_2702 178_001_scaffold_2702
Species: Clostridium perfringens (100%)
2 1745 bp 31.23 7.74 86.65
NECEvent2014_8_1_scaffold_2130 178_001_scaffold_2130
Species: Clostridium perfringens (100%)
3 2224 bp 30.22 7.69 98.47
NECEvent2014_8_1_scaffold_1362 178_001_scaffold_1362
Species: Clostridium perfringens (75%)
4 3526 bp 30.80 7.66 90.70
NECEvent2014_8_1_scaffold_2231 178_001_scaffold_2231
Species: Clostridium perfringens (100%)
1 2120 bp 31.18 7.64 80.94
NECEvent2014_8_1_scaffold_1923 178_001_scaffold_1923
Species: Clostridium perfringens (100%)
2 2477 bp 28.99 7.63 88.17
NECEvent2014_8_1_scaffold_2340 178_001_scaffold_2340
Species: Clostridium perfringens (100%)
2 2009 bp 28.67 7.62 85.57
NECEvent2014_8_1_scaffold_3132 178_001_scaffold_3132
Species: Clostridium perfringens (100%)
3 1497 bp 30.66 7.62 85.17
NECEvent2014_8_1_scaffold_2908 178_001_scaffold_2908
Species: Clostridium perfringens (50%)
2 1624 bp 29.74 7.57 99.01
NECEvent2014_8_1_scaffold_2901 178_001_scaffold_2901
Species: Clostridium perfringens (100%)
1 1628 bp 31.70 7.56 99.88
NECEvent2014_8_1_scaffold_2771 178_001_scaffold_2771
Species: Clostridium tetanomorphum (50%)
2 1706 bp 31.13 7.56 96.89
NECEvent2014_8_1_scaffold_1158 178_001_scaffold_1158
Species: Clostridium perfringens (100%)
4 4091 bp 31.17 7.55 97.24
NECEvent2014_8_1_scaffold_3105 178_001_scaffold_3105
Species: Clostridium perfringens (100%)
2 1511 bp 27.99 7.54 95.70
NECEvent2014_8_1_scaffold_1900 178_001_scaffold_1900
Species: Clostridium perfringens (100%)
4 2507 bp 32.51 7.54 88.31
NECEvent2014_8_1_scaffold_4317 178_001_scaffold_4317
Species: Clostridium perfringens (100%)
2 1074 bp 30.63 7.54 92.74
NECEvent2014_8_1_scaffold_4238 178_001_scaffold_4238
Species: Clostridium sp. IBUN22A (100%)
1 1095 bp 24.75 7.53 81.92
NECEvent2014_8_1_scaffold_2087 178_001_scaffold_2087
Species: Clostridium perfringens (100%)
4 2280 bp 30.26 7.50 74.87
NECEvent2014_8_1_scaffold_2116 178_001_scaffold_2116
Species: Clostridium perfringens (100%)
2 2240 bp 31.12 7.50 95.89
NECEvent2014_8_1_scaffold_3081 178_001_scaffold_3081
Species: Clostridium perfringens (100%)
2 1521 bp 31.76 7.50 86.98
NECEvent2014_8_1_scaffold_3865 178_001_scaffold_3865
Species: Clostridium perfringens (100%)
2 1201 bp 29.81 7.49 87.68
NECEvent2014_8_1_scaffold_3858 178_001_scaffold_3858
Species: Clostridium perfringens (100%)
1 1204 bp 29.15 7.48 99.92
NECEvent2014_8_1_scaffold_3620 178_001_scaffold_3620
Species: Clostridium perfringens (100%)
2 1286 bp 30.56 7.47 97.28
NECEvent2014_8_1_scaffold_2603 178_001_scaffold_2603
Species: Clostridium perfringens (100%)
4 1810 bp 29.39 7.46 92.49
NECEvent2014_8_1_scaffold_3422 178_001_scaffold_3422
Species: Clostridium perfringens (100%)
1 1367 bp 29.85 7.46 99.85
NECEvent2014_8_1_scaffold_2628 178_001_scaffold_2628
Species: Clostridium perfringens (100%)
2 1792 bp 31.31 7.45 84.71
NECEvent2014_8_1_scaffold_2792 178_001_scaffold_2792
Species: Clostridium perfringens (100%)
3 1692 bp 30.32 7.45 91.13
NECEvent2014_8_1_scaffold_2251 178_001_scaffold_2251
Species: Clostridium perfringens (100%)
3 2096 bp 30.63 7.44 91.32
NECEvent2014_8_1_scaffold_2029 178_001_scaffold_2029
Species: Clostridium perfringens (100%)
3 2340 bp 31.67 7.44 96.15
NECEvent2014_8_1_scaffold_4409 178_001_scaffold_4409
Species: Clostridium perfringens (100%)
1 1051 bp 27.50 7.42 82.78
NECEvent2014_8_1_scaffold_2421 178_001_scaffold_2421
Species: Clostridium perfringens (100%)
2 1941 bp 31.12 7.42 100.62
NECEvent2014_8_1_scaffold_2321 178_001_scaffold_2321
Species: Clostridium perfringens (100%)
1 2025 bp 31.90 7.41 99.85
NECEvent2014_8_1_scaffold_4242 178_001_scaffold_4242
Species: Clostridium perfringens (100%)
1 1094 bp 32.82 7.40 98.17
NECEvent2014_8_1_scaffold_1834 178_001_scaffold_1834
Species: Clostridium perfringens (100%)
1 2599 bp 30.36 7.39 86.80
NECEvent2014_8_1_scaffold_4550 178_001_scaffold_4550
Species: Clostridium perfringens (100%)
1 1016 bp 29.63 7.38 91.83
NECEvent2014_8_1_scaffold_2765 178_001_scaffold_2765
Species: Clostridium perfringens (100%)
3 1708 bp 30.21 7.38 86.42
NECEvent2014_8_1_scaffold_2161 178_001_scaffold_2161
Species: Clostridium perfringens (100%)
2 2197 bp 26.95 7.37 88.89
NECEvent2014_8_1_scaffold_2233 178_001_scaffold_2233
Species: Clostridium perfringens (100%)
1 2116 bp 30.39 7.37 99.95
NECEvent2014_8_1_scaffold_1798 178_001_scaffold_1798
Species: Clostridium perfringens (100%)
2 2645 bp 31.49 7.37 92.21
NECEvent2014_8_1_scaffold_2896 178_001_scaffold_2896
Species: Clostridium perfringens (100%)
1 1630 bp 31.53 7.36 92.02
Displaying items 351-400 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.