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NECEvent2014_8_2_Clostridium_butyricum_28_32

NECEvent2014_8_2_Clostridium_29_34
In projects: NECEvent2014_8_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 385 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_1789 178_002_scaffold_1789
Species: Clostridium sp. IBUN125C (100%)
4 3193 bp 28.00 36.27 83.81
NECEvent2014_8_2_scaffold_912 178_002_scaffold_912
Species: Clostridium sp. IBUN125C (50%)
8 8493 bp 28.00 36.28 94.63
NECEvent2014_8_2_scaffold_602 178_002_scaffold_602
Genus: Clostridium (92.86%)
14 13004 bp 29.15 36.31 81.16
NECEvent2014_8_2_scaffold_114 178_002_scaffold_114
Species: Clostridium butyricum (53.66%)
41 42124 bp 29.62 36.33 87.07
NECEvent2014_8_2_scaffold_433 178_002_scaffold_433
Genus: Clostridium (75%)
20 17710 bp 29.63 36.34 87.78
NECEvent2014_8_2_scaffold_160 178_002_scaffold_160
Species: Clostridium butyricum (55.17%)
29 35955 bp 28.58 36.41 86.35
NECEvent2014_8_2_scaffold_101 178_002_scaffold_101
Species: Clostridium butyricum (71.43%)
35 44618 bp 28.86 36.48 89.62
NECEvent2014_8_2_scaffold_135 178_002_scaffold_135
Genus: Clostridium (92.68%)
41 39792 bp 28.94 36.51 91.85
NECEvent2014_8_2_scaffold_540 178_002_scaffold_540
Genus: Clostridium (92.31%)
13 14254 bp 29.28 36.61 83.20
NECEvent2014_8_2_scaffold_1502 178_002_scaffold_1502
Species: Clostridium butyricum (66.67%)
3 4192 bp 29.29 36.68 91.46
NECEvent2014_8_2_scaffold_393 178_002_scaffold_393
Species: Clostridium butyricum (68.75%)
16 18783 bp 29.30 36.70 80.85
NECEvent2014_8_2_scaffold_2847 178_002_scaffold_2847
Species: Clostridium butyricum (100%)
1 1641 bp 29.98 36.75 84.46
NECEvent2014_8_2_scaffold_889 178_002_scaffold_889
Species: Clostridium butyricum (88.89%)
9 8864 bp 30.08 36.76 82.82
NECEvent2014_8_2_scaffold_1172 178_002_scaffold_1172
Species: Clostridium sp. IBUN125C (75%)
4 5841 bp 29.50 36.77 91.73
NECEvent2014_8_2_scaffold_1332 178_002_scaffold_1332
Species: Clostridium butyricum (80%)
5 4933 bp 28.66 36.85 80.46
NECEvent2014_8_2_scaffold_598 178_002_scaffold_598
Species: Clostridium butyricum (64.29%)
14 13115 bp 30.14 37.08 89.74
NECEvent2014_8_2_scaffold_1134 178_002_scaffold_1134
Species: Clostridium sp. IBUN22A (50%)
8 6128 bp 27.59 37.11 91.16
NECEvent2014_8_2_scaffold_199 178_002_scaffold_199
Species: Clostridium butyricum (71.43%)
35 32263 bp 30.23 37.11 88.63
NECEvent2014_8_2_scaffold_739 178_002_scaffold_739
Species: Clostridium sp. IBUN125C (66.67%)
6 10761 bp 31.17 37.19 89.66
NECEvent2014_8_2_scaffold_77 178_002_scaffold_77
Genus: Clostridium (97.78%)
45 51519 bp 30.45 37.24 89.17
NECEvent2014_8_2_scaffold_245 178_002_scaffold_245
Species: Clostridium butyricum (62.07%)
29 27405 bp 29.67 37.36 86.32
NECEvent2014_8_2_scaffold_3204 178_002_scaffold_3204
Species: Clostridium butyricum (100%)
1 1416 bp 28.74 37.50 83.69
NECEvent2014_8_2_scaffold_895 178_002_scaffold_895
Species: Clostridium butyricum (50%)
8 8744 bp 30.54 37.50 83.75
NECEvent2014_8_2_scaffold_2917 178_002_scaffold_2917
Species: Clostridium sp. IBUN13A (66.67%)
3 1599 bp 28.52 37.52 68.48
NECEvent2014_8_2_scaffold_1654 178_002_scaffold_1654
Species: Clostridium sp. IBUN125C (100%)
1 3605 bp 31.96 37.53 95.62
NECEvent2014_8_2_scaffold_518 178_002_scaffold_518
Species: Clostridium butyricum (61.54%)
13 14717 bp 29.91 37.53 86.82
NECEvent2014_8_2_scaffold_618 178_002_scaffold_618
Species: Clostridium sp. IBUN125C (53.85%)
13 12487 bp 28.35 37.56 89.01
NECEvent2014_8_2_scaffold_61 178_002_scaffold_61
Species: Clostridium butyricum (50%)
42 54548 bp 29.11 37.67 87.58
NECEvent2014_8_2_scaffold_63 178_002_scaffold_63
Species: Clostridium butyricum (51.06%)
47 53584 bp 29.23 37.74 88.18
NECEvent2014_8_2_scaffold_469 178_002_scaffold_469
Species: Clostridium sp. IBUN13A (71.43%)
21 16269 bp 28.10 37.94 81.97
NECEvent2014_8_2_scaffold_502 178_002_scaffold_502
Genus: Clostridium (91.67%)
12 15192 bp 29.75 37.94 93.15
NECEvent2014_8_2_scaffold_300 178_002_scaffold_300
Genus: Clostridium (68.18%)
22 23353 bp 28.59 38.00 80.01
NECEvent2014_8_2_scaffold_161 178_002_scaffold_161
Genus: Clostridium (76%)
25 35934 bp 29.37 38.12 90.40
NECEvent2014_8_2_scaffold_1876 178_002_scaffold_1876 5 2954 bp 27.96 38.19 84.26
NECEvent2014_8_2_scaffold_798 178_002_scaffold_798
Species: Clostridium butyricum (50%)
10 9891 bp 28.89 38.20 75.16
NECEvent2014_8_2_scaffold_709 178_002_scaffold_709
Genus: Clostridium (100%)
11 11233 bp 28.03 38.30 88.03
NECEvent2014_8_2_scaffold_891 178_002_scaffold_891
Genus: Clostridium (81.82%)
11 8819 bp 29.33 38.35 87.06
NECEvent2014_8_2_scaffold_627 178_002_scaffold_627
Species: Clostridium butyricum (50%)
8 12442 bp 28.87 38.48 87.29
NECEvent2014_8_2_scaffold_1889 178_002_scaffold_1889
Species: Clostridium butyricum (50%)
2 2929 bp 28.27 38.51 81.84
NECEvent2014_8_2_scaffold_162 178_002_scaffold_162
Genus: Clostridium (87.1%)
31 35889 bp 29.37 38.53 84.61
NECEvent2014_8_2_scaffold_1237 178_002_scaffold_1237
Species: Clostridium butyricum (66.67%)
9 5532 bp 29.59 38.53 85.20
NECEvent2014_8_2_scaffold_396 178_002_scaffold_396
Species: Clostridium butyricum (50%)
12 18742 bp 30.62 38.58 84.16
NECEvent2014_8_2_scaffold_1101 178_002_scaffold_1101
Species: Clostridium butyricum (75%)
4 6505 bp 28.79 38.60 83.01
NECEvent2014_8_2_scaffold_200 178_002_scaffold_200
Species: Clostridium butyricum (58.62%)
29 32250 bp 29.40 38.60 85.43
NECEvent2014_8_2_scaffold_616 178_002_scaffold_616
Species: Clostridium butyricum (69.23%)
13 12509 bp 29.75 38.61 90.53
NECEvent2014_8_2_scaffold_683 178_002_scaffold_683
Species: Clostridium butyricum (55.56%)
9 11633 bp 29.43 38.77 83.89
NECEvent2014_8_2_scaffold_232 178_002_scaffold_232
Genus: Clostridium (85.71%)
28 28703 bp 28.87 38.80 85.12
NECEvent2014_8_2_scaffold_1037 178_002_scaffold_1037
Species: Clostridium sp. IBUN125C (50%)
6 7159 bp 28.08 38.87 88.50
NECEvent2014_8_2_scaffold_334 178_002_scaffold_334
Genus: Clostridium (71.43%)
21 21578 bp 29.02 39.03 87.16
NECEvent2014_8_2_scaffold_477 178_002_scaffold_477
Species: Clostridium butyricum (53.85%)
13 15927 bp 28.98 39.05 81.75
Displaying items 301-350 of 385 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.