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NECEvent2014_8_2_Enterobacteriales_53_7_hint

NECEvent2014_8_2_Enterobacteriales_53_7
In projects: NECEvent2014_8_2

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Refined from TS ESOM

Displaying items 251-300 of 1344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_2642 178_002_scaffold_2642
Species: Kosakonia radicincitans (66.67%)
3 1797 bp 53.64 5.68 91.82
NECEvent2014_8_2_scaffold_4156 178_002_scaffold_4156
Order: Enterobacteriales (66.67%)
3 1024 bp 57.42 5.57 92.58
NECEvent2014_8_2_scaffold_4157 178_002_scaffold_4157
Genus: Citrobacter (66.67%)
3 1023 bp 57.18 8.50 100.59
NECEvent2014_8_2_scaffold_3438 178_002_scaffold_3438
Genus: Kosakonia (66.67%)
3 1286 bp 52.57 6.07 89.35
NECEvent2014_8_2_scaffold_2133 178_002_scaffold_2133
Species: Klebsiella pneumoniae (66.67%)
3 2479 bp 58.17 8.96 98.99
NECEvent2014_8_2_scaffold_2135 178_002_scaffold_2135
Species: Kosakonia radicincitans (66.67%)
3 2472 bp 47.86 7.16 62.14
NECEvent2014_8_2_scaffold_2392 178_002_scaffold_2392
Species: Enterobacter sp. YD4 (66.67%)
3 2075 bp 53.06 7.52 99.90
NECEvent2014_8_2_scaffold_2904 178_002_scaffold_2904
Order: Enterobacteriales (100%)
3 1606 bp 53.36 5.42 94.52
NECEvent2014_8_2_scaffold_1881 178_002_scaffold_1881
Species: Enterobacter cloacae (66.67%)
3 2948 bp 58.14 5.80 92.10
NECEvent2014_8_2_scaffold_2650 178_002_scaffold_2650
Species: Kosakonia radicincitans (66.67%)
3 1790 bp 53.13 6.37 92.18
NECEvent2014_8_2_scaffold_2395 178_002_scaffold_2395 3 2072 bp 49.66 9.12 72.49
NECEvent2014_8_2_scaffold_2651 178_002_scaffold_2651 3 1790 bp 44.64 7.12 36.54
NECEvent2014_8_2_scaffold_2911 178_002_scaffold_2911
Species: Kosakonia sacchari (66.67%)
3 1601 bp 50.72 5.43 87.13
NECEvent2014_8_2_scaffold_3706 178_002_scaffold_3706 3 1175 bp 47.40 7.15 80.00
NECEvent2014_8_2_scaffold_2657 178_002_scaffold_2657
Genus: Citrobacter (66.67%)
3 1788 bp 50.00 7.55 62.25
NECEvent2014_8_2_scaffold_2913 178_002_scaffold_2913
Order: Enterobacteriales (100%)
3 1601 bp 59.84 8.43 99.13
NECEvent2014_8_2_scaffold_3195 178_002_scaffold_3195
Species: Salmonella enterica (100%)
3 1421 bp 50.60 6.12 99.01
NECEvent2014_8_2_scaffold_2658 178_002_scaffold_2658 3 1788 bp 43.96 9.23 77.85
NECEvent2014_8_2_scaffold_3452 178_002_scaffold_3452
Species: Klebsiella oxytoca (66.67%)
3 1280 bp 56.33 8.20 99.61
NECEvent2014_8_2_scaffold_4172 178_002_scaffold_4172
Order: Enterobacteriales (100%)
3 1017 bp 54.08 8.11 90.56
NECEvent2014_8_2_scaffold_3198 178_002_scaffold_3198
Order: Enterobacteriales (100%)
3 1420 bp 51.13 7.08 55.14
NECEvent2014_8_2_scaffold_2149 178_002_scaffold_2149
Species: Enterobacter sp. YD4 (66.67%)
3 2447 bp 51.41 7.60 77.73
NECEvent2014_8_2_scaffold_2405 178_002_scaffold_2405
Order: Enterobacteriales (100%)
3 2049 bp 59.15 5.71 97.95
NECEvent2014_8_2_scaffold_3711 178_002_scaffold_3711
Order: Enterobacteriales (100%)
3 1171 bp 50.47 8.84 80.19
NECEvent2014_8_2_scaffold_2663 178_002_scaffold_2663
Genus: Citrobacter (66.67%)
3 1785 bp 50.81 7.90 88.91
NECEvent2014_8_2_scaffold_2664 178_002_scaffold_2664
Genus: Enterobacter (66.67%)
3 1784 bp 51.23 6.22 87.11
NECEvent2014_8_2_scaffold_3970 178_002_scaffold_3970
Order: Enterobacteriales (66.67%)
3 1079 bp 49.49 7.51 79.80
NECEvent2014_8_2_scaffold_2153 178_002_scaffold_2153
Species: Kosakonia sacchari (66.67%)
3 2441 bp 57.80 5.04 91.93
NECEvent2014_8_2_scaffold_2154 178_002_scaffold_2154
Order: Enterobacteriales (100%)
3 2441 bp 56.45 6.76 94.02
NECEvent2014_8_2_scaffold_2666 178_002_scaffold_2666
Species: Enterobacter cloacae (66.67%)
3 1783 bp 53.67 4.71 91.87
NECEvent2014_8_2_scaffold_2922 178_002_scaffold_2922
Genus: Enterobacter (66.67%)
3 1594 bp 54.77 5.83 89.21
NECEvent2014_8_2_scaffold_3205 178_002_scaffold_3205
Genus: Enterobacter (66.67%)
3 1415 bp 54.56 7.42 93.71
NECEvent2014_8_2_scaffold_3461 178_002_scaffold_3461
Order: Enterobacteriales (100%)
3 1276 bp 56.19 4.94 90.99
NECEvent2014_8_2_scaffold_2668 178_002_scaffold_2668
Species: Escherichia vulneris (66.67%)
3 1783 bp 52.50 5.64 99.94
NECEvent2014_8_2_scaffold_3718 178_002_scaffold_3718
Species: Enterobacter sp. R4-368 (66.67%)
3 1169 bp 52.87 5.13 86.74
NECEvent2014_8_2_scaffold_2925 178_002_scaffold_2925
Order: Enterobacteriales (100%)
3 1592 bp 51.01 7.63 92.53
NECEvent2014_8_2_scaffold_3207 178_002_scaffold_3207
Order: Enterobacteriales (100%)
3 1414 bp 52.83 6.47 85.93
NECEvent2014_8_2_scaffold_4183 178_002_scaffold_4183
Order: Enterobacteriales (100%)
3 1012 bp 55.04 7.41 101.09
NECEvent2014_8_2_scaffold_4184 178_002_scaffold_4184
Order: Enterobacteriales (100%)
3 1012 bp 59.98 8.15 93.97
NECEvent2014_8_2_scaffold_3721 178_002_scaffold_3721
Order: Enterobacteriales (66.67%)
3 1167 bp 50.90 4.11 76.09
NECEvent2014_8_2_scaffold_3977 178_002_scaffold_3977
Genus: Enterobacter (66.67%)
3 1076 bp 56.51 10.04 87.83
NECEvent2014_8_2_scaffold_1904 178_002_scaffold_1904
Genus: Kosakonia (66.67%)
3 2890 bp 55.95 6.23 93.32
NECEvent2014_8_2_scaffold_2672 178_002_scaffold_2672
Species: Enterobacter sp. R4-368 (66.67%)
3 1781 bp 62.16 7.33 100.06
NECEvent2014_8_2_scaffold_3466 178_002_scaffold_3466
Genus: Enterobacter (66.67%)
3 1275 bp 55.53 5.18 91.76
NECEvent2014_8_2_scaffold_2417 178_002_scaffold_2417
Order: Enterobacteriales (100%)
3 2033 bp 55.63 5.76 95.77
NECEvent2014_8_2_scaffold_3979 178_002_scaffold_3979
Genus: Enterobacter (66.67%)
3 1076 bp 53.44 5.16 85.04
NECEvent2014_8_2_scaffold_2163 178_002_scaffold_2163
Order: Enterobacteriales (100%)
3 2435 bp 55.61 6.65 83.90
NECEvent2014_8_2_scaffold_2932 178_002_scaffold_2932
Order: Enterobacteriales (100%)
3 1584 bp 50.69 5.21 61.17
NECEvent2014_8_2_scaffold_3214 178_002_scaffold_3214
Genus: Enterobacter (100%)
3 1410 bp 55.53 7.66 91.28
NECEvent2014_8_2_scaffold_2677 178_002_scaffold_2677
Genus: Enterobacter (100%)
3 1776 bp 57.88 5.91 98.99
Displaying items 251-300 of 1344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.