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NECEvent2014_8_3_scaffold_90

Alias: 178_003_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_90_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..948)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWJ9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36427.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
aminopeptidase, M42 family
NECEvent2014_8_3_scaffold_90_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1138..2670)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z980_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36426.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative cell wall binding protein
NECEvent2014_8_3_scaffold_90_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2815..3876)
DNA (1062bp) protein (354aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
hisC3; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9G2_CLOBU rbh
NECEvent2014_8_3_scaffold_90_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3979..5646)
DNA (1668bp) protein (556aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
leuA1; 2-isopropylmalate synthase LeuA (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUI7_CLOBU rbh
NECEvent2014_8_3_scaffold_90_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6023..6634
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ66_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36423.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_90_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6795..7715
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AWJ5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36422.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative permease
NECEvent2014_8_3_scaffold_90_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7760..8686)
DNA (927bp) protein (309aa)
ykfA1; murein peptide carboxypeptidase YkfA (EC:3.4.16.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z974_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36421.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_90_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8824..9321)
DNA (498bp) protein (166aa)
Transcriptional regulator, CarD family n=2 Tax=Clostridium butyricum RepID=M8JAE6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83853.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ydeB1; putative transcription factor YdeB
NECEvent2014_8_3_scaffold_90_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9585..10187
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUI4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36419.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
LysM domain-containing protein
NECEvent2014_8_3_scaffold_90_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10251..11636)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ61_CLOBU rbh
Putative ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KJZ83848.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
ErfK/YbiS/YcfS/YnhG family protein
NECEvent2014_8_3_scaffold_90_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12090..12632)
DNA (543bp) protein (181aa)
Collagenolytic protease n=3 Tax=Clostridium butyricum RepID=B1R1E2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36417.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_90_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12959..14329
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z969_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87916.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hyd; FeFe-hydrogenase group B2
NECEvent2014_8_3_scaffold_90_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14399..17626)
DNA (3228bp) protein (1076aa)
UPI0003D5B34B related cluster n=1 Tax=unknown RepID=UPI0003D5B34B rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83855.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sensor histidine kinase/response regulator
NECEvent2014_8_3_scaffold_90_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17946..19982)
DNA (2037bp) protein (679aa)
UPI0003D68366 related cluster n=1 Tax=unknown RepID=UPI0003D68366 rbh
Penicillin-binding protein 3 {ECO:0000313|EMBL:ETI89364.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.
peptidoglycan glycosyltransferase
NECEvent2014_8_3_scaffold_90_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20143..20424)
DNA (282bp) protein (94aa)
UPI0003D639C0 related cluster n=1 Tax=unknown RepID=UPI0003D639C0
Competence protein {ECO:0000313|EMBL:ETI89365.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_90_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20562..21878)
DNA (1317bp) protein (439aa)
tRNA nucleotidyltransferase {ECO:0000313|EMBL:KJZ83883.1}; EC=2.7.7.72 {ECO:0000313|EMBL:KJZ83883.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
cca; CCA-adding enzyme (EC:2.7.7.72)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridium butyricum RepID=M8JJG6_CLOBU rbh
NECEvent2014_8_3_scaffold_90_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21968..22864)
DNA (897bp) protein (299aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium butyricum RepID=B1R1E8_CLOBU rbh
N-acetylmannosamine kinase {ECO:0000313|EMBL:KHD16158.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transcriptional regulator
NECEvent2014_8_3_scaffold_90_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23033..23749)
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase n=3 Tax=Clostridium butyricum RepID=B1R1E9_CLOBU rbh
NECEvent2014_8_3_scaffold_90_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23925..25373)
DNA (1449bp) protein (483aa)
Putative Trk system potassium uptake protein TrkH n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KED5_CLOBU rbh
Cation transporter {ECO:0000313|EMBL:ETI89369.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
trkH; Trk system potassium uptake protein TrkH
NECEvent2014_8_3_scaffold_90_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25363..26739)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ51_CLOBU rbh
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:KJZ83881.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. I
trkA; potassium transporter peripheral membrane component
NECEvent2014_8_3_scaffold_90_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27014..27598
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWH9_CLOBU rbh
Serine/threonine kinase-like protein {ECO:0000313|EMBL:KJZ83839.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN1
serine/threonine kinase-like protein
NECEvent2014_8_3_scaffold_90_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27642..28133)
DNA (492bp) protein (164aa)
Metal dependent phosphohydrolase n=2 Tax=Clostridium butyricum RepID=M8JKT7_CLOBU rbh
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:KJZ85373.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. I
metal dependent phosphohydrolase
NECEvent2014_8_3_scaffold_90_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28231..28548)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1F4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83914.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_90_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28774..31512)
DNA (2739bp) protein (913aa)
putative calcium-transporting ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEE2_CLOBU rbh
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ36404.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_3_scaffold_90_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31813..32352)
DNA (540bp) protein (180aa)
Phosphoesterase, hxtx n=2 Tax=Clostridium butyricum RepID=M8K648_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36403.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase, HXTX
NECEvent2014_8_3_scaffold_90_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32718..34379)
DNA (1662bp) protein (554aa)
Na/Pi cotransporter family protein n=3 Tax=Clostridium butyricum RepID=C4II97_CLOBU rbh
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KJZ83875.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
Na/Pi-cotransporter II-like protein
NECEvent2014_8_3_scaffold_90_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34749..35606)
DNA (858bp) protein (286aa)
rlmA; 23S rRNA (guanine(745)-N(1))-methyltransferase RlmA (EC:2.1.1.187)
SAM-dependent methyltransferase n=4 Tax=Clostridium butyricum RepID=B1R1F7_CLOBU rbh
Methyltransferase domain protein {ECO:0000313|EMBL:EEP55014.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
NECEvent2014_8_3_scaffold_90_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35827..37797)
DNA (1971bp) protein (657aa)
Serine phosphatase n=3 Tax=Clostridium butyricum RepID=B1R1F8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85367.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_90_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38024..38461)
DNA (438bp) protein (146aa)
Serine-protein kinase RsbW {ECO:0000313|EMBL:KJZ83910.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJZ83910.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Anti-sigma regulatory factor n=4 Tax=Clostridium butyricum RepID=B1R1F9_CLOBU
Anti-sigma regulatory factor (Ser/Thr protein kinase)
NECEvent2014_8_3_scaffold_90_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38528..40624)
DNA (2097bp) protein (699aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
glycogen debranching protein GlgX (EC:3.2.1.68)
Glycogen debranching enzyme n=2 Tax=Clostridium butyricum RepID=B1R1G0_CLOBU rbh
Displaying items 1-30 of 31 in total

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