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NECEvent2014_8_3_scaffold_414

Alias: 178_003_scaffold_414

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_414_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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247..1167
DNA (921bp) protein (307aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=445334 s
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTV2_CLOP1 rbh
NECEvent2014_8_3_scaffold_414_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1535..2182
DNA (648bp) protein (216aa)
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ4_CLOPF rbh
RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT16803.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_3_scaffold_414_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2603..4846
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN30_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB80214.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein rbh
NECEvent2014_8_3_scaffold_414_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4924..5940
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT16704.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT16704.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=2 Tax=Clostridium perfringens RepID=B1BNG0_CLOPF rbh
galE; UDP-glucose 4-epimerase
NECEvent2014_8_3_scaffold_414_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6222..7166
DNA (945bp) protein (315aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451756 s
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF rbh
galF; UTP-glucose-1-phosphate uridylyltransferase
NECEvent2014_8_3_scaffold_414_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7500..8192
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16734.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_414_trna_1
unknown

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8336..8408
DNA (73bp)
transferRNA
NECEvent2014_8_3_scaffold_414_7
unknown

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8531..8680
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_414_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8772..13463
DNA (4692bp) protein (1564aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTU6_CLOP1 rbh
cell wall binding repeat-containing protein
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18241.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_8_3_scaffold_414_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13886..16090
DNA (2205bp) protein (735aa)
Alpha-galactosidase {ECO:0000313|EMBL:EDT27848.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EDT27848.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Alpha-galactosidase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDD7_CLOPF rbh
agaN; alpha-galactosidase
NECEvent2014_8_3_scaffold_414_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16238..16987)
DNA (750bp) protein (250aa)
Sortase B n=2 Tax=Clostridium perfringens RepID=B1BNC4_CLOPF rbh
Sortase B {ECO:0000313|EMBL:EDT16651.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sortase
NECEvent2014_8_3_scaffold_414_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17226..17750
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000313|EMBL:EDT24946.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EDT24946.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Signal peptidase I n=2 Tax=Clostridium perfringens RepID=B1R3T3_CLOPF rbh
signal peptidase type I
NECEvent2014_8_3_scaffold_414_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17805..18428
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNC2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
Displaying 13 items

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