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NECEvent2014_8_3_scaffold_603

Alias: 178_003_scaffold_603

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_603_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..236
DNA (234bp) protein (78aa)
DNA polymerase beta domain protein region n=1 Tax=Clostridium sp. DL-VIII RepID=G7M8W1_9CLOT
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EHJ01446.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D
nucleotidyltransferase domain protein
NECEvent2014_8_3_scaffold_603_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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253..1668
DNA (1416bp) protein (472aa)
GntR-family transcritional regulator n=2 Tax=Clostridium botulinum RepID=B2V2R8_CLOBA
GntR family transcriptional regulator {ECO:0000313|EMBL:KJU70850.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
GntR family transcriptional regulator
NECEvent2014_8_3_scaffold_603_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1656..2306
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TIP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51205.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
hypothetical protein
NECEvent2014_8_3_scaffold_603_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2383..3120
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein A500_15910 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUH1_9CLOT rbh
Probable transcriptional regulatory protein A500_15910 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
hypothetical protein
NECEvent2014_8_3_scaffold_603_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3258..3980)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EK79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01652.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
putative secreted protein
NECEvent2014_8_3_scaffold_603_6
unknown

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4123..4263
DNA (141bp) protein (47aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_603_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4304..4633)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UXE7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07746.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_3_scaffold_603_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4889..5764
DNA (876bp) protein (292aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G0J0_9CLOT
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:CDM68900.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_8_3_scaffold_603_9
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5898..10532
DNA (4635bp) protein (1545aa)
Alpha-1,3-galactosidase B domain protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=E7FY30_ERYRH rbh
Alpha-1,3-galactosidase B domain protein {ECO:0000313|EMBL:EFY08404.1}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source=
pectin lyase fold-containing protein
NECEvent2014_8_3_scaffold_603_10
unknown

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10811..11077
DNA (267bp) protein (89aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_603_11
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11130..11519
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z9E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGR78760.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
hypothetical protein
NECEvent2014_8_3_scaffold_603_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11643..12542)
DNA (900bp) protein (300aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EHI98181.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHI98181.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYC0_9CLOT
short-chain dehydrogenase/reductase SDR
NECEvent2014_8_3_scaffold_603_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12655..13278
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MST7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43849.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
Displaying 13 items

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