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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_3105 178_004_scaffold_3105
Species: Streptococcus mitis (100%)
3 2019 bp 45.22 6.24 98.51
NECEvent2014_8_4_scaffold_3620 178_004_scaffold_3620
Genus: Streptococcus (100%)
3 1718 bp 38.13 3.49 90.10
NECEvent2014_8_4_scaffold_2599 178_004_scaffold_2599
Species: Streptococcus mitis (100%)
3 2527 bp 42.62 7.42 98.77
NECEvent2014_8_4_scaffold_4906 178_004_scaffold_4906
Species: Streptococcus mitis (100%)
3 1205 bp 40.00 3.98 98.09
NECEvent2014_8_4_scaffold_5418 178_004_scaffold_5418
Species: Streptococcus mitis (100%)
3 1067 bp 40.39 4.36 89.13
NECEvent2014_8_4_scaffold_1835 178_004_scaffold_1835
Genus: Streptococcus (100%)
3 3530 bp 38.90 5.86 58.47
NECEvent2014_8_4_scaffold_2093 178_004_scaffold_2093
Species: Streptococcus mitis (100%)
3 3113 bp 44.68 5.20 96.47
NECEvent2014_8_4_scaffold_2605 178_004_scaffold_2605
Species: Streptococcus sp. HSISS3 (66.67%)
3 2519 bp 41.33 4.23 88.13
NECEvent2014_8_4_scaffold_2862 178_004_scaffold_2862
Species: Streptococcus mitis (66.67%)
3 2241 bp 42.84 6.63 95.31
NECEvent2014_8_4_scaffold_5169 178_004_scaffold_5169
Species: Streptococcus mitis (66.67%)
3 1131 bp 41.03 5.04 96.29
NECEvent2014_8_4_scaffold_4408 178_004_scaffold_4408
Species: Streptococcus mitis (100%)
2 1367 bp 45.79 4.50 101.39
NECEvent2014_8_4_scaffold_5433 178_004_scaffold_5433
Species: Streptococcus mitis (100%)
2 1063 bp 44.31 3.39 100.47
NECEvent2014_8_4_scaffold_5692 178_004_scaffold_5692
Species: Streptococcus mitis (100%)
2 1003 bp 39.18 4.04 100.20
NECEvent2014_8_4_scaffold_4159 178_004_scaffold_4159
Species: Streptococcus pseudopneumoniae (50%)
2 1466 bp 41.95 4.30 97.61
NECEvent2014_8_4_scaffold_5183 178_004_scaffold_5183
Species: Streptococcus sp. M334 (50%)
2 1127 bp 40.91 3.99 83.58
NECEvent2014_8_4_scaffold_3649 178_004_scaffold_3649
Species: Streptococcus mitis (100%)
2 1703 bp 46.10 5.28 99.71
NECEvent2014_8_4_scaffold_4164 178_004_scaffold_4164
Species: Streptococcus mitis (50%)
2 1465 bp 42.87 6.86 103.62
NECEvent2014_8_4_scaffold_3914 178_004_scaffold_3914
Species: Streptococcus mitis (100%)
2 1571 bp 43.67 3.53 90.90
NECEvent2014_8_4_scaffold_3923 178_004_scaffold_3923
Species: Streptococcus mitis (100%)
2 1568 bp 37.24 6.22 80.36
NECEvent2014_8_4_scaffold_4949 178_004_scaffold_4949
Species: Streptococcus mitis (100%)
2 1194 bp 45.81 7.04 98.74
NECEvent2014_8_4_scaffold_5206 178_004_scaffold_5206
Species: Streptococcus mitis (100%)
2 1122 bp 35.20 4.28 80.75
NECEvent2014_8_4_scaffold_2647 178_004_scaffold_2647
Species: Streptococcus mitis (100%)
2 2469 bp 40.91 4.98 96.11
NECEvent2014_8_4_scaffold_2904 178_004_scaffold_2904
Species: Streptococcus mitis (100%)
2 2202 bp 43.55 4.63 95.91
NECEvent2014_8_4_scaffold_5208 178_004_scaffold_5208
Species: Streptococcus mitis (100%)
2 1122 bp 41.98 4.14 98.13
NECEvent2014_8_4_scaffold_4189 178_004_scaffold_4189
Species: Streptococcus mitis (100%)
2 1453 bp 34.69 4.96 99.93
NECEvent2014_8_4_scaffold_4705 178_004_scaffold_4705
Species: Streptococcus mitis (100%)
2 1267 bp 41.28 3.08 89.98
NECEvent2014_8_4_scaffold_2659 178_004_scaffold_2659
Species: Streptococcus mitis (100%)
2 2461 bp 41.24 6.10 95.21
NECEvent2014_8_4_scaffold_4963 178_004_scaffold_4963
Species: Streptococcus mitis (100%)
2 1190 bp 33.36 3.28 100.08
NECEvent2014_8_4_scaffold_4204 178_004_scaffold_4204
Species: Streptococcus mitis (100%)
2 1446 bp 39.35 4.77 92.53
NECEvent2014_8_4_scaffold_3950 178_004_scaffold_3950
Species: Streptococcus mitis (100%)
2 1557 bp 42.13 4.05 98.07
NECEvent2014_8_4_scaffold_4724 178_004_scaffold_4724
Species: Streptococcus mitis (50%)
2 1261 bp 39.41 2.97 74.23
NECEvent2014_8_4_scaffold_5492 178_004_scaffold_5492
Species: Streptococcus mitis (50%)
2 1052 bp 42.59 3.14 83.56
NECEvent2014_8_4_scaffold_2165 178_004_scaffold_2165
Species: Streptococcus pneumoniae (50%)
2 3030 bp 41.88 5.20 82.38
NECEvent2014_8_4_scaffold_3190 178_004_scaffold_3190
Species: Streptococcus mitis (100%)
2 1966 bp 43.18 4.88 94.00
NECEvent2014_8_4_scaffold_4472 178_004_scaffold_4472
Species: Streptococcus mitis (100%)
2 1341 bp 41.69 4.70 92.17
NECEvent2014_8_4_scaffold_2940 178_004_scaffold_2940
Species: Streptococcus mitis (100%)
2 2167 bp 34.93 5.12 88.88
NECEvent2014_8_4_scaffold_4992 178_004_scaffold_4992
Species: Streptococcus mitis (100%)
2 1183 bp 41.08 2.66 86.48
NECEvent2014_8_4_scaffold_3714 178_004_scaffold_3714
Species: Streptococcus mitis (100%)
2 1671 bp 44.76 4.22 94.97
NECEvent2014_8_4_scaffold_4227 178_004_scaffold_4227
Species: Streptococcus mitis (50%)
2 1436 bp 43.45 5.33 79.18
NECEvent2014_8_4_scaffold_4995 178_004_scaffold_4995
Species: Streptococcus mitis (100%)
2 1183 bp 35.76 5.33 101.18
NECEvent2014_8_4_scaffold_3716 178_004_scaffold_3716
Species: Streptococcus mitis (100%)
2 1670 bp 34.61 3.77 60.00
NECEvent2014_8_4_scaffold_5508 178_004_scaffold_5508
Species: Streptococcus mitis (100%)
2 1048 bp 38.55 5.44 99.62
NECEvent2014_8_4_scaffold_4232 178_004_scaffold_4232
Species: Streptococcus mitis (100%)
2 1435 bp 42.93 3.97 87.39
NECEvent2014_8_4_scaffold_2960 178_004_scaffold_2960
Species: Streptococcus mitis (100%)
2 2147 bp 41.64 4.05 95.58
NECEvent2014_8_4_scaffold_3473 178_004_scaffold_3473
Species: Streptococcus mitis (100%)
2 1787 bp 40.74 4.95 89.82
NECEvent2014_8_4_scaffold_3730 178_004_scaffold_3730
Species: Streptococcus sp. SK643 (50%)
2 1664 bp 39.54 5.68 87.08
NECEvent2014_8_4_scaffold_3731 178_004_scaffold_3731
Species: Streptococcus mitis (100%)
2 1664 bp 44.23 4.51 96.09
NECEvent2014_8_4_scaffold_5011 178_004_scaffold_5011
Species: Streptococcus mitis (50%)
2 1179 bp 39.02 5.47 74.55
NECEvent2014_8_4_scaffold_2709 178_004_scaffold_2709
Species: Streptococcus mitis (100%)
2 2407 bp 38.80 3.86 92.73
NECEvent2014_8_4_scaffold_4502 178_004_scaffold_4502
Species: Streptococcus mitis (50%)
2 1331 bp 42.15 4.85 93.99
Displaying items 301-350 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.