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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 351-400 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_5014 178_004_scaffold_5014
Species: Streptococcus mitis (50%)
2 1178 bp 37.69 5.86 90.15
NECEvent2014_8_4_scaffold_3224 178_004_scaffold_3224
Species: Streptococcus mitis (100%)
2 1948 bp 40.97 4.77 90.25
NECEvent2014_8_4_scaffold_3996 178_004_scaffold_3996
Species: Streptococcus mitis (100%)
2 1538 bp 40.77 4.39 95.19
NECEvent2014_8_4_scaffold_2461 178_004_scaffold_2461
Species: Streptococcus mitis (100%)
2 2668 bp 40.82 4.78 95.13
NECEvent2014_8_4_scaffold_1184 178_004_scaffold_1184
Species: Streptococcus mitis (100%)
2 5438 bp 43.20 6.45 98.97
NECEvent2014_8_4_scaffold_2981 178_004_scaffold_2981
Species: Streptococcus mitis (50%)
2 2127 bp 38.69 4.80 90.27
NECEvent2014_8_4_scaffold_5542 178_004_scaffold_5542
Species: Streptococcus mitis (100%)
2 1041 bp 44.57 5.48 94.52
NECEvent2014_8_4_scaffold_2471 178_004_scaffold_2471
Species: Streptococcus mitis (100%)
2 2657 bp 42.79 3.84 95.52
NECEvent2014_8_4_scaffold_3752 178_004_scaffold_3752
Species: Streptococcus mitis (100%)
2 1653 bp 43.19 4.45 90.02
NECEvent2014_8_4_scaffold_4521 178_004_scaffold_4521
Species: Streptococcus mitis (50%)
2 1321 bp 33.31 10.90 31.11
NECEvent2014_8_4_scaffold_4777 178_004_scaffold_4777
Species: Streptococcus mitis (50%)
2 1246 bp 35.71 4.33 90.29
NECEvent2014_8_4_scaffold_4268 178_004_scaffold_4268
Species: Streptococcus mitis (100%)
2 1421 bp 41.52 4.64 100.07
NECEvent2014_8_4_scaffold_4019 178_004_scaffold_4019
Species: Streptococcus mitis (100%)
2 1529 bp 44.80 4.32 98.50
NECEvent2014_8_4_scaffold_3764 178_004_scaffold_3764
Species: Streptococcus mitis (100%)
2 1644 bp 42.15 4.38 93.98
NECEvent2014_8_4_scaffold_3256 178_004_scaffold_3256
Species: Streptococcus sp. SK643 (50%)
2 1924 bp 43.30 6.47 95.27
NECEvent2014_8_4_scaffold_4024 178_004_scaffold_4024
Species: Streptococcus mitis (100%)
2 1528 bp 34.10 4.22 81.09
NECEvent2014_8_4_scaffold_5049 178_004_scaffold_5049
Species: Streptococcus mitis (100%)
2 1168 bp 42.21 4.88 94.78
NECEvent2014_8_4_scaffold_5050 178_004_scaffold_5050
Species: Streptococcus mitis (100%)
2 1168 bp 45.80 4.75 100.43
NECEvent2014_8_4_scaffold_4027 178_004_scaffold_4027
Species: Streptococcus sp. M143 (50%)
2 1527 bp 41.98 8.06 96.46
NECEvent2014_8_4_scaffold_4539 178_004_scaffold_4539
Species: Streptococcus mitis (100%)
2 1316 bp 41.57 5.59 82.07
NECEvent2014_8_4_scaffold_2493 178_004_scaffold_2493
Species: Streptococcus mitis (100%)
2 2629 bp 41.57 5.71 78.17
NECEvent2014_8_4_scaffold_4288 178_004_scaffold_4288
Species: Streptococcus mitis (100%)
2 1411 bp 42.95 5.53 88.87
NECEvent2014_8_4_scaffold_5321 178_004_scaffold_5321
Species: Streptococcus pneumoniae (50%)
2 1090 bp 39.91 5.37 87.80
NECEvent2014_8_4_scaffold_1994 178_004_scaffold_1994
Species: Streptococcus mitis (100%)
2 3254 bp 43.05 6.04 85.83
NECEvent2014_8_4_scaffold_3530 178_004_scaffold_3530
Species: Streptococcus sp. DORA_10 (50%)
2 1760 bp 42.73 3.92 96.65
NECEvent2014_8_4_scaffold_4042 178_004_scaffold_4042
Species: Streptococcus mitis (50%)
2 1521 bp 41.95 5.03 97.24
NECEvent2014_8_4_scaffold_4557 178_004_scaffold_4557
Species: Streptococcus mitis (100%)
2 1311 bp 40.20 3.66 93.59
NECEvent2014_8_4_scaffold_5327 178_004_scaffold_5327
Species: Streptococcus mitis (100%)
2 1088 bp 41.64 7.03 72.79
NECEvent2014_8_4_scaffold_4817 178_004_scaffold_4817
Species: Streptococcus sp. M143 (50%)
2 1234 bp 36.79 6.81 75.61
NECEvent2014_8_4_scaffold_5075 178_004_scaffold_5075
Species: Streptococcus mitis (50%)
2 1159 bp 39.17 3.11 99.91
NECEvent2014_8_4_scaffold_5077 178_004_scaffold_5077
Species: Streptococcus pneumoniae (50%)
2 1159 bp 42.02 3.62 72.99
NECEvent2014_8_4_scaffold_4310 178_004_scaffold_4310
Species: Streptococcus mitis (50%)
2 1403 bp 40.48 5.13 99.64
NECEvent2014_8_4_scaffold_4827 178_004_scaffold_4827
Species: Streptococcus mitis (100%)
2 1229 bp 44.75 3.78 99.11
NECEvent2014_8_4_scaffold_3551 178_004_scaffold_3551
Species: Streptococcus mitis (100%)
2 1753 bp 38.79 4.88 99.43
NECEvent2014_8_4_scaffold_3301 178_004_scaffold_3301
Species: Streptococcus mitis (100%)
2 1893 bp 42.68 5.39 90.81
NECEvent2014_8_4_scaffold_3303 178_004_scaffold_3303
Species: Streptococcus mitis (100%)
2 1891 bp 40.24 5.87 79.80
NECEvent2014_8_4_scaffold_3049 178_004_scaffold_3049
Species: Enterococcus hirae (50%)
2 2069 bp 37.99 5.29 100.19
NECEvent2014_8_4_scaffold_2032 178_004_scaffold_2032
Species: Streptococcus mitis (100%)
2 3200 bp 44.59 4.97 96.56
NECEvent2014_8_4_scaffold_4849 178_004_scaffold_4849
Species: Streptococcus mitis (50%)
2 1221 bp 42.10 4.67 97.05
NECEvent2014_8_4_scaffold_3836 178_004_scaffold_3836
Species: Streptococcus sp. DORA_10 (50%)
2 1610 bp 42.24 3.35 98.94
NECEvent2014_8_4_scaffold_3837 178_004_scaffold_3837
Species: Streptococcus mitis (50%)
2 1610 bp 39.38 5.40 90.75
NECEvent2014_8_4_scaffold_4096 178_004_scaffold_4096
Species: Streptococcus mitis (100%)
2 1493 bp 39.65 4.22 90.02
NECEvent2014_8_4_scaffold_4608 178_004_scaffold_4608
Species: Streptococcus mitis (100%)
2 1295 bp 41.24 4.75 94.75
NECEvent2014_8_4_scaffold_2050 178_004_scaffold_2050
Species: Streptococcus mitis (50%)
2 3171 bp 41.78 6.53 89.59
NECEvent2014_8_4_scaffold_2562 178_004_scaffold_2562
Species: Streptococcus mitis (100%)
2 2559 bp 44.00 5.33 99.06
NECEvent2014_8_4_scaffold_5381 178_004_scaffold_5381
Species: Streptococcus mitis (100%)
2 1076 bp 38.48 5.02 86.71
NECEvent2014_8_4_scaffold_3846 178_004_scaffold_3846
Species: Streptococcus mitis (100%)
2 1606 bp 35.24 4.11 100.13
NECEvent2014_8_4_scaffold_4369 178_004_scaffold_4369
Species: Streptococcus sp. DORA_10 (50%)
2 1380 bp 40.43 3.59 96.09
NECEvent2014_8_4_scaffold_2326 178_004_scaffold_2326
Species: Streptococcus mitis (100%)
2 2829 bp 42.77 4.93 92.36
NECEvent2014_8_4_scaffold_3352 178_004_scaffold_3352
Species: Streptococcus pneumoniae (50%)
2 1862 bp 40.87 4.59 87.33
Displaying items 351-400 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.