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NECEvent2014_8_5_scaffold_884

Alias: 178_005_scaffold_884

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_884_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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152..1885
DNA (1734bp) protein (578aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP06_CLOPF rbh
ABC transporter permease/ATP-binding protein
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT28072.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_8_5_scaffold_884_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1878..3659
DNA (1782bp) protein (594aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNS9_CLOPF rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT16764.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
ABC transporter
NECEvent2014_8_5_scaffold_884_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3741..4139)
DNA (399bp) protein (133aa)
Conserved domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW06_CLOPS
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABG85940.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM
NECEvent2014_8_5_scaffold_884_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4407..5432
DNA (1026bp) protein (342aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Glycosyl hydrolase, family 25 n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNS7_CLOPF rbh
autolytic lysozyme
NECEvent2014_8_5_scaffold_884_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5689..6087
DNA (399bp) protein (133aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP02_CLOPF
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EDS81071.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
toxin secretion/phage lysis holin
NECEvent2014_8_5_scaffold_884_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6250..7170)
DNA (921bp) protein (307aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDN1_CLOPF rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDT27975.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
polysaccharide deacetylase
NECEvent2014_8_5_scaffold_884_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7577..8395
DNA (819bp) protein (273aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=5 Tax=Clostridium perfringens RepID=Q0TU60_CLOP1 rbh
short chain dehydrogenase/reductase oxidoreductase
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT27838.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_8_5_scaffold_884_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8418..9149)
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGK6_CLOPF rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDS80972.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
transcriptional regulator
NECEvent2014_8_5_scaffold_884_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9383..10168
DNA (786bp) protein (262aa)
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Uridine phosphorylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW01_CLOPS rbh
NECEvent2014_8_5_scaffold_884_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10346..11536
DNA (1191bp) protein (397aa)
deoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000255|HAMAP-Rule:MF_00740}; EC=5.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00740};; Phosphodeoxyribomutase {ECO:0000255|HAMAP-Rule:MF_00740}; TaxID=195103 species="Bacteria; Firmicute
Phosphopentomutase n=7 Tax=Clostridium perfringens RepID=DEOB_CLOP1 rbh
Displaying 10 items

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