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NECEvent2014_8_6_Klebsiella_pneumoniae-rel_57_348_partial

NECEvent2014_8_6_Klebsiella_57_365
In projects: NECEvent2014_8_6

Consensus taxonomy: Klebsiella  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Probably has low coverage minor strain resolvable by TS ESOM

Displaying items 301-350 of 546 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_6_scaffold_2671 178_006_scaffold_2671
Species: Klebsiella variicola (50%)
2 1543 bp 60.08 406.55 90.02
NECEvent2014_8_6_scaffold_157 178_006_scaffold_157
Species: Klebsiella pneumoniae (50%)
42 39511 bp 57.42 423.68 90.08
NECEvent2014_8_6_scaffold_97 178_006_scaffold_97
Species: Klebsiella pneumoniae (51.79%)
56 63502 bp 57.00 332.22 90.12
NECEvent2014_8_6_scaffold_586 178_006_scaffold_586
Species: Klebsiella variicola (60%)
10 8770 bp 57.83 328.89 90.17
NECEvent2014_8_6_scaffold_167 178_006_scaffold_167
Genus: Klebsiella (100%)
24 24317 bp 59.83 362.28 90.17
NECEvent2014_8_6_scaffold_393 178_006_scaffold_393
Species: Klebsiella pneumoniae (52.94%)
17 17462 bp 59.87 424.03 90.20
NECEvent2014_8_6_scaffold_1129 178_006_scaffold_1129
Genus: Klebsiella (80%)
5 4373 bp 56.85 310.29 90.21
NECEvent2014_8_6_scaffold_626 178_006_scaffold_626
Species: Klebsiella pneumoniae (54.55%)
11 9361 bp 59.64 356.39 90.21
NECEvent2014_8_6_scaffold_208 178_006_scaffold_208
Genus: Klebsiella (100%)
47 48197 bp 57.32 341.59 90.34
NECEvent2014_8_6_scaffold_1667 178_006_scaffold_1667
Species: Klebsiella pneumoniae (66.67%)
3 2786 bp 60.55 303.77 90.45
NECEvent2014_8_6_scaffold_1186 178_006_scaffold_1186
Species: Klebsiella pneumoniae (60%)
5 4106 bp 59.67 428.37 90.45
NECEvent2014_8_6_scaffold_1878 178_006_scaffold_1878
Species: Klebsiella pneumoniae (100%)
2 2378 bp 61.44 138.08 90.45
NECEvent2014_8_6_scaffold_1315 178_006_scaffold_1315
Species: Klebsiella pneumoniae (50%)
10 7336 bp 61.33 264.61 90.46
NECEvent2014_8_6_scaffold_329 178_006_scaffold_329
Genus: Klebsiella (97.14%)
35 30513 bp 57.63 398.82 90.51
NECEvent2014_8_6_scaffold_2061 178_006_scaffold_2061
Species: Klebsiella pneumoniae (50%)
4 2144 bp 43.84 358.35 90.53
NECEvent2014_8_6_scaffold_764 178_006_scaffold_764
Species: Klebsiella pneumoniae (70%)
10 8125 bp 57.77 501.21 90.54
NECEvent2014_8_6_scaffold_505 178_006_scaffold_505
Genus: Klebsiella (95%)
20 22539 bp 60.29 432.30 90.54
NECEvent2014_8_6_scaffold_217 178_006_scaffold_217
Genus: Klebsiella (95.24%)
21 25288 bp 60.61 351.80 90.58
NECEvent2014_8_6_scaffold_761 178_006_scaffold_761
Genus: Klebsiella (57.89%)
19 16945 bp 49.10 285.11 90.59
NECEvent2014_8_6_scaffold_299 178_006_scaffold_299
Species: Klebsiella pneumoniae (51.28%)
39 40213 bp 58.63 381.94 90.61
NECEvent2014_8_6_scaffold_628 178_006_scaffold_628
Genus: Klebsiella (85.71%)
7 8123 bp 58.22 483.13 90.63
NECEvent2014_8_6_scaffold_905 178_006_scaffold_905
Species: Klebsiella variicola (57.14%)
7 8188 bp 59.57 284.26 90.64
NECEvent2014_8_6_scaffold_1491 178_006_scaffold_1491
Species: Klebsiella pneumoniae (75%)
8 8081 bp 56.35 446.27 90.73
NECEvent2014_8_6_scaffold_277 178_006_scaffold_277
Species: Klebsiella pneumoniae (56.52%)
23 19198 bp 60.61 288.73 90.78
NECEvent2014_8_6_scaffold_417 178_006_scaffold_417
Genus: Klebsiella (95.65%)
23 21424 bp 57.27 346.74 90.81
NECEvent2014_8_6_scaffold_414 178_006_scaffold_414
Genus: Klebsiella (100%)
13 11967 bp 59.50 345.21 90.82
NECEvent2014_8_6_scaffold_284 178_006_scaffold_284
Species: Enterobacter aerogenes (53.33%)
15 15560 bp 55.01 358.32 90.85
NECEvent2014_8_6_scaffold_324 178_006_scaffold_324
Genus: Klebsiella (100%)
22 24793 bp 57.98 393.41 90.86
NECEvent2014_8_6_scaffold_385 178_006_scaffold_385
Genus: Klebsiella (94.44%)
18 16048 bp 58.54 462.22 90.91
NECEvent2014_8_6_scaffold_159 178_006_scaffold_159
Genus: Klebsiella (100%)
55 56500 bp 57.90 451.94 90.91
NECEvent2014_8_6_scaffold_570 178_006_scaffold_570
Species: Klebsiella pneumoniae (53.85%)
13 9047 bp 55.72 382.68 90.91
NECEvent2014_8_6_scaffold_749 178_006_scaffold_749
Genus: Klebsiella (100%)
7 6816 bp 59.35 337.13 90.93
NECEvent2014_8_6_scaffold_1225 178_006_scaffold_1225
Genus: Klebsiella (100%)
7 6616 bp 58.56 462.36 90.96
NECEvent2014_8_6_scaffold_390 178_006_scaffold_390
Genus: Klebsiella (96.67%)
30 35425 bp 58.16 431.19 90.98
NECEvent2014_8_6_scaffold_1271 178_006_scaffold_1271
Genus: Klebsiella (75%)
12 9665 bp 60.19 295.81 91.01
NECEvent2014_8_6_scaffold_120 178_006_scaffold_120
Genus: Klebsiella (96.67%)
30 31900 bp 57.40 398.55 91.03
NECEvent2014_8_6_scaffold_518 178_006_scaffold_518
Species: Klebsiella variicola (61.9%)
21 24877 bp 60.21 282.54 91.10
NECEvent2014_8_6_scaffold_671 178_006_scaffold_671
Species: Klebsiella variicola (55.56%)
9 7539 bp 61.90 287.66 91.13
NECEvent2014_8_6_scaffold_1140 178_006_scaffold_1140
Genus: Klebsiella (77.78%)
9 7193 bp 59.49 399.37 91.13
NECEvent2014_8_6_scaffold_137 178_006_scaffold_137
Genus: Klebsiella (100%)
61 68526 bp 60.41 317.71 91.13
NECEvent2014_8_6_scaffold_2840 178_006_scaffold_2840
Species: Klebsiella variicola (50%)
2 2064 bp 59.98 540.92 91.13
NECEvent2014_8_6_scaffold_332 178_006_scaffold_332
Genus: Klebsiella (95.92%)
49 47118 bp 57.81 466.89 91.17
NECEvent2014_8_6_scaffold_724 178_006_scaffold_724
Species: Klebsiella pneumoniae (50%)
6 7062 bp 59.80 275.64 91.21
NECEvent2014_8_6_scaffold_706 178_006_scaffold_706
Species: Klebsiella variicola (50%)
8 7224 bp 48.06 351.87 91.24
NECEvent2014_8_6_scaffold_196 178_006_scaffold_196
Species: Klebsiella pneumoniae (63.64%)
33 22329 bp 50.08 495.43 91.28
NECEvent2014_8_6_scaffold_181 178_006_scaffold_181
Species: Klebsiella pneumoniae (80.95%)
21 22757 bp 62.10 130.69 91.33
NECEvent2014_8_6_scaffold_502 178_006_scaffold_502
Order: Enterobacteriales (100%)
11 10178 bp 51.70 226.25 91.40
NECEvent2014_8_6_scaffold_912 178_006_scaffold_912
Species: Klebsiella pneumoniae (64.29%)
14 9589 bp 59.74 614.34 91.42
NECEvent2014_8_6_scaffold_788 178_006_scaffold_788
Species: Klebsiella pneumoniae (61.54%)
26 27223 bp 56.81 345.12 91.49
NECEvent2014_8_6_scaffold_568 178_006_scaffold_568
Genus: Klebsiella (94.74%)
19 17094 bp 60.92 442.99 91.56
Displaying items 301-350 of 546 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.