ggKbase home page

NECEvent2014_8_6_scaffold_309

Alias: 178_006_scaffold_309

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_309_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1183)
DNA (1182bp) protein (394aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVJ8_CLOBU rbh
two-component system sensor histidine kinase
NECEvent2014_8_6_scaffold_309_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1185..1880)
DNA (696bp) protein (232aa)
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=3 Tax=Clostridium butyricum RepID=B1QUC9_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ36071.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
Two-component response regulator
NECEvent2014_8_6_scaffold_309_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1914..2873)
DNA (960bp) protein (320aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=2 Tax=Clostridium butyricum RepID=B1QUD0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83819.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ApbE family lipoprotein
NECEvent2014_8_6_scaffold_309_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2906..3457)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATJ1_CLOBU rbh
Polyferredoxin {ECO:0000313|EMBL:KJZ82914.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
FMN-binding domain-containing protein
NECEvent2014_8_6_scaffold_309_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3495..4367)
DNA (873bp) protein (291aa)
Polyferredoxin n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KCG9_CLOBU rbh
Polyferredoxin {ECO:0000313|EMBL:ETI91410.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
napH; polyferredoxin NapH
NECEvent2014_8_6_scaffold_309_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4669..5934
DNA (1266bp) protein (422aa)
Permease n=2 Tax=Clostridium butyricum RepID=B1QUD3_CLOBU rbh
Permease {ECO:0000313|EMBL:EEP53524.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
NECEvent2014_8_6_scaffold_309_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5935..6399
DNA (465bp) protein (155aa)
Response regulator receiver protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHL8_CLOBU rbh
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:ETI91408.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
response regulator receiver protein
NECEvent2014_8_6_scaffold_309_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6418..7119
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8J3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36065.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_6_scaffold_309_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7160..7717)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATI5_CLOBU rbh
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:KJZ82883.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
GNAT family acetyltransferase
NECEvent2014_8_6_scaffold_309_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7744..8250)
DNA (507bp) protein (169aa)
Topology modulation protein n=2 Tax=Clostridium butyricum RepID=B1QUD7_CLOBU rbh
DNA topology modulation flar-like protein {ECO:0000313|EMBL:KJZ82885.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
topology modulation protein
NECEvent2014_8_6_scaffold_309_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8516..9061
DNA (546bp) protein (182aa)
rbr3B; Reverse rubrerythrin-2 (EC:1.11.1.1)
Rubredoxin/rubrerythrin n=3 Tax=Clostridium butyricum RepID=B1QUD8_CLOBU rbh
Rubrerythrin {ECO:0000313|EMBL:KJZ82874.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_6_scaffold_309_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9089..9409
DNA (321bp) protein (107aa)
Glycerol-3-phosphate dehydrogenase NAD(P) {ECO:0000313|EMBL:KJZ84638.1}; EC=1.1.1.94 {ECO:0000313|EMBL:KJZ84638.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QUD9_CLOBU
hypothetical protein
NECEvent2014_8_6_scaffold_309_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9499..9963)
DNA (465bp) protein (155aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=3 Tax=Clostridium butyricum RepID=B1QUE0_CLOBU rbh
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
NECEvent2014_8_6_scaffold_309_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10085..11281)
DNA (1197bp) protein (399aa)
ribBA: riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATH8_CLOBU rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_8_6_scaffold_309_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11330..11983)
DNA (654bp) protein (218aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI77_CLOBU rbh
tRNA (Guanine37-N1)-methyltransferase {ECO:0000313|EMBL:KJZ84542.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
NECEvent2014_8_6_scaffold_309_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11999..13081)
DNA (1083bp) protein (361aa)
ribD: riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=2 Tax=Clostridium butyricum RepID=B1QUE3_CLOBU rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
NECEvent2014_8_6_scaffold_309_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13561..14772)
DNA (1212bp) protein (404aa)
Tetratricopeptide repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QUE4_CLOBU rbh
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:EEP53735.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
ST7 protein
Displaying 17 items

View Taxonomy