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NECEvent2014_8_6_scaffold_149_2

Organism: NECEvent2014_8_6_Clostridium_butyricum_29_21

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(1348..1968)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=3 Tax=Clostridium butyricum RepID=C4IF71_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 404
  • Evalue 7.90e-110
  • rbh
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EEP55192.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 206.0
  • Bit_score: 403
  • Evalue 2.50e-109
sigH; RNA polymerase sigma-H factor SigH similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 206.0
  • Bit_score: 373
  • Evalue 3.20e-101

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
TTGGAAGGATTTTTAGAATTTAAAGACAAACTAGATGAAGAGATTGTTATGGATGCTAAAGCTGGAAATAACAAAGCACAAGAGTATTTAATTTCCAAATATGAAAATTTTGTAAAAGCTAAAGCTAAATCATATTTTCTTATAGGCGCTGATAAAGAGGATATTTATCAAGAGGGTATGATTGGATTATATAAGGCTATACGTGATTTCAATCCTGAAAAATCTACATCTTTTAAAGCTTTTGCAGAAATATGTGTAACTAGACAGATTATTACAGCCATTAAAACTGCTACTAGACAAAAGCACATACCTTTAAATACTTATGTATCACTAAATAAACCGATATATGAAGAAGAATCAGAAAGAACTCTTTTGGATGTGTTATCTGGATTAAAAATATCTGATCCTGAAGAGTTGATGATTAGTAAAGAACAAATGCATTTTATAGAGGATAAAATTTCGAAAGTCTTGTCTGAGCTTGAAAAAGAGGTGTTAACATCTTATCTGGATGGTAAATCGTACCAAGAAATTGCGTGCGATTTAGAAAGGCATGCGAAATCTATAGATAATGCACTTCAAAGAGTGAAAAGAAAATTAGAAAAATGCTTGAAAGTAAAGTGA
PROTEIN sequence
Length: 207
LEGFLEFKDKLDEEIVMDAKAGNNKAQEYLISKYENFVKAKAKSYFLIGADKEDIYQEGMIGLYKAIRDFNPEKSTSFKAFAEICVTRQIITAIKTATRQKHIPLNTYVSLNKPIYEEESERTLLDVLSGLKISDPEELMISKEQMHFIEDKISKVLSELEKEVLTSYLDGKSYQEIACDLERHAKSIDNALQRVKRKLEKCLKVK*