ggKbase home page

NECEvent2014_8_6_scaffold_72

Alias: 178_006_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_72_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..833
DNA (636bp) protein (212aa)
Protein YfdX n=154 Tax=Escherichia RepID=YFDX_ECOLI rbh
hypothetical protein
Protein yfdX {ECO:0000313|EMBL:EMX31190.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP02156
NECEvent2014_8_6_scaffold_72_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1346..2596
DNA (1251bp) protein (417aa)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO
Formyl-coenzyme A transferase n=818 Tax=Enterobacteriaceae RepID=FCTA_ECO24 rbh
formyl-coenzyme A transferase
NECEvent2014_8_6_scaffold_72_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2650..4344
DNA (1695bp) protein (565aa)
oxc; putative oxalyl-CoA decarboxylase (EC:4.1.1.8)
Probable oxalyl-CoA decarboxylase n=447 Tax=Enterobacteriaceae RepID=OXC_ECO57 rbh
Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:ELI24335.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_72_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4414..5358
DNA (945bp) protein (315aa)
Uncharacterized transporter YfdV n=1346 Tax=Enterobacteriaceae RepID=YFDV_ECO57 rbh
transporter, auxin efflux carrier family
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EFJ66598.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_8_6_scaffold_72_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5432..6577
DNA (1146bp) protein (382aa)
Uncharacterized protein YfdE n=485 Tax=Enterobacteriaceae RepID=YFDE_ECOLI rbh
putative CoA-transferase rbh
CoA-transferase III family protein {ECO:0000313|EMBL:EMV57724.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_6_scaffold_72_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6633..10226)
DNA (3594bp) protein (1198aa)
Sensor protein EvgS n=66 Tax=Escherichia RepID=EVGS_ECOLI rbh
hybrid sensory histidine kinase in two-component regulatory system with EvgA
Sensor protein evgS {ECO:0000313|EMBL:ESK03422.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_6_scaffold_72_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10231..10845)
DNA (615bp) protein (205aa)
Positive transcription regulator EvgA n=1387 Tax=Enterobacteriaceae RepID=EVGA_ECO57 rbh
evgA; positive transcription regulator EvgA
Putative positive transcription regulator {ECO:0000313|EMBL:ABE08167.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_8_6_scaffold_72_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11261..12424
DNA (1164bp) protein (388aa)
Probable multidrug resistance protein EmrK n=266 Tax=Enterobacteriaceae RepID=EMRK_ECOLI rbh
EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component
Putative multidrug resistance protein EmrK {ECO:0000313|EMBL:AKA91428.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_6_scaffold_72_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12424..13962
DNA (1539bp) protein (513aa)
Probable multidrug resistance protein EmrY n=405 Tax=Enterobacteriaceae RepID=EMRY_ECOLI rbh
emrY; putative multidrug efflux system rbh
Multidrug resistance protein Y {ECO:0000313|EMBL:EID67271.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_8_6_scaffold_72_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14070..15398)
DNA (1329bp) protein (443aa)
dsdA; D-serine dehydratase (EC:4.3.1.18)
D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=475609 species="Bacteria; Proteobact
D-serine dehydratase n=201 Tax=Enterobacteriaceae RepID=SDHD_ECOBW rbh
NECEvent2014_8_6_scaffold_72_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15416..16753)
DNA (1338bp) protein (446aa)
DsdX permease n=817 Tax=Enterobacteriaceae RepID=DSDX_ECOLI rbh
permease DsdX rbh
DsdX permease {ECO:0000313|EMBL:KDY53899.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-
NECEvent2014_8_6_scaffold_72_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16971..17906
DNA (936bp) protein (312aa)
HTH-type transcriptional regulator DsdC n=69 Tax=Escherichia RepID=DSDC_ECOLI rbh
LysR family transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACG50160.1}; TaxID=1167694 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_6_scaffold_72_trna_1
unknown

Not on your lists

comp(18005..18076)
DNA (72bp)
transferRNA
NECEvent2014_8_6_scaffold_72_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18152..19084)
DNA (933bp) protein (311aa)
Inner membrane protein YfdC n=116 Tax=Escherichia RepID=YFDC_ECOLI rbh
formate/nitrite transporter
Inner membrane protein yfdC {ECO:0000313|EMBL:KEO23480.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_72_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19378..20133
DNA (756bp) protein (252aa)
Probable phospholipid-binding lipoprotein MlaA n=31 Tax=Escherichia coli RepID=MLAA_ECOLI rbh
vacJ; predicted lipoprotein
Putative phospholipid-binding lipoprotein mlaA {ECO:0000313|EMBL:KEO23478.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_8_6_scaffold_72_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20315..21373)
DNA (1059bp) protein (353aa)
Uncharacterized protein YfdF n=95 Tax=Escherichia RepID=YFDF_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY67473.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_72_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21740..23080)
DNA (1341bp) protein (447aa)
Long-chain fatty acid transport protein n=138 Tax=Escherichia RepID=FADL_ECOLI rbh
long-chain fatty acid outer membrane transport protein
Outer membrane transport family protein {ECO:0000313|EMBL:KEO31959.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_8_6_scaffold_72_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23452..23736
DNA (285bp) protein (95aa)
UPF0381 protein YfcZ n=679 Tax=Escherichia RepID=YFCZ_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX90290.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_72_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23917..25227
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022530}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022453};; ACSs {ECO:0000256|HAMAP-Rule:MF
3-ketoacyl-CoA thiolase n=132 Tax=Escherichia RepID=FADI_ECOBW rbh
yfcY; 3-ketoacyl-CoA thiolase rbh
NECEvent2014_8_6_scaffold_72_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25227..27371
DNA (2145bp) protein (715aa)
Fatty acid oxidation complex subunit alpha n=82 Tax=Escherichia RepID=FADJ_ECOBW rbh
fadJ; Fatty acid oxidation complex subunit alpha
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01617, ECO:0000256|SAAS:SAAS00051619}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
NECEvent2014_8_6_scaffold_72_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27574..28059
DNA (486bp) protein (162aa)
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EFK04857.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFK04857.1};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
Phosphohistidine phosphatase SixA n=630 Tax=Enterobacteriaceae RepID=SIXA_ECOLI rbh
sixA; Phosphohistidine phosphatase sixA
NECEvent2014_8_6_scaffold_72_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28740..29303
DNA (564bp) protein (188aa)
Uncharacterized fimbrial-like protein YfcV n=120 Tax=Escherichia RepID=YFCV_ECOLI rbh
Fimbrial protein
Fimbrial protein {ECO:0000313|EMBL:EFI88990.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 1
NECEvent2014_8_6_scaffold_72_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29385..32030
DNA (2646bp) protein (882aa)
Putative outer membrane usher protein YfcU n=71 Tax=Enterobacteriaceae RepID=YFCU_ECOLI rbh
Type VII secretion system (T7SS), usher family protein {ECO:0000313|EMBL:KDY53887.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
hypothetical protein rbh
NECEvent2014_8_6_scaffold_72_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32050..32802
DNA (753bp) protein (251aa)
Uncharacterized fimbrial chaperone YfcS n=95 Tax=Escherichia RepID=YFCS_ECOLI rbh
Pili assembly chaperone, N-terminal rbh
Gram-negative pili assembly chaperone, C-terminal domain protein {ECO:0000313|EMBL:KDX85673.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_8_6_scaffold_72_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32802..33314
DNA (513bp) protein (171aa)
Uncharacterized protein YfcR n=111 Tax=Escherichia RepID=YFCR_ECOLI rbh
yfcR; predicted fimbrial-like adhesin protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ66576.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_72_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33311..33799
DNA (489bp) protein (163aa)
Uncharacterized fimbrial-like protein YfcQ n=109 Tax=Escherichia RepID=YFCQ_ECOLI rbh
hypothetical protein
Fimbrial family protein {ECO:0000313|EMBL:KEN89718.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_72_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33796..34335
DNA (540bp) protein (180aa)
Uncharacterized fimbrial-like protein YfcP n=110 Tax=Escherichia RepID=YFCP_ECOLI rbh
Fimbrial protein
Fimbrial family protein {ECO:0000313|EMBL:EMX31161.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_72_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34337..35158
DNA (822bp) protein (274aa)
Uncharacterized protein YfcO n=120 Tax=Escherichia RepID=YFCO_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDZ17025.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_72_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35229..35780)
DNA (552bp) protein (184aa)
UPF0115 protein YfcN n=794 Tax=Enterobacteriaceae RepID=YFCN_ECO24 rbh
hypothetical protein
UPF0115 protein YfcN {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_72_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35946..36878
DNA (933bp) protein (311aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine
HemK family modification methylase (EC:2.1.1.72)
50S ribosomal protein L3 glutamine methyltransferase n=132 Tax=Escherichia RepID=PRMB_ECOLI rbh
Displaying items 1-30 of 37 in total

View Taxonomy