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NECEvent2014_8_6_scaffold_75

Alias: 178_006_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_75_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133..330)
DNA (198bp) protein (66aa)
Uncharacterized protein YjeT n=1249 Tax=Enterobacteriaceae RepID=YJET_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDZ16526.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_75_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412..1416)
DNA (1005bp) protein (335aa)
Modulator of FtsH protease HflC n=1420 Tax=Bacteria RepID=HFLC_ECO57 rbh
hflC; modulator for HflB protease specific for phage lambda CII repressor
Modulator of FtsH protease HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_8_6_scaffold_75_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1419..2678)
DNA (1260bp) protein (420aa)
hflK; regulator of FtsH protease, subunit of HflK-HflC complex; regulator of FtsH protease and HflB, integral membrane ATP-dependent zinc metallopeptidase (EC:3.4.24.-)
Protein HflK n=859 Tax=Enterobacteriaceae RepID=HFLK_ECO57 rbh
HflK protein {ECO:0000313|EMBL:KEN84949.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-0
NECEvent2014_8_6_scaffold_75_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2764..4044)
DNA (1281bp) protein (427aa)
GTPase HflX n=962 Tax=Enterobacteriaceae RepID=C3SG37_ECOLX rbh
hflX; GTPase, stimulated by 50S subunit binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
NECEvent2014_8_6_scaffold_75_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4120..4428)
DNA (309bp) protein (103aa)
RNA-binding protein Hfq n=1365 Tax=Enterobacteriaceae RepID=HFQ_ECO24
hfq; RNA chaperone protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_8_6_scaffold_75_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..5464)
DNA (951bp) protein (317aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) rbh
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=511 Tax=Enterobacteriaceae RepID=MIAA_ECO24 rbh
NECEvent2014_8_6_scaffold_75_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5457..7304)
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=134 Tax=Escherichia RepID=MUTL_ECOBW rbh
mutL; MutL, subunit of MutHLS complex, methyl-directed mismatch repair
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_8_6_scaffold_75_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7314..8651)
DNA (1338bp) protein (446aa)
N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:EMV15194.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EMV15194.1};; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
N-acetylmuramoyl-L-alanine amidase AmiB n=138 Tax=Enterobacteriaceae RepID=AMIB_ECOLI rbh
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_8_6_scaffold_75_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8670..9131)
DNA (462bp) protein (154aa)
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1100 Tax=Bacteria RepID=TSAE_ECO57 rbh
hypothetical protein
ATPase {ECO:0000313|EMBL:ELE54813.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
NECEvent2014_8_6_scaffold_75_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9103..10635)
DNA (1533bp) protein (511aa)
Bifunctional NAD(P)H-hydrate repair enzyme Nnr n=178 Tax=Escherichia RepID=NNR_ECOLI rbh
yjeF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENA01064.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_75_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10649..11788
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1444153 specie
Epoxyqueuosine reductase n=2 Tax=Enterobacteriaceae RepID=F4NKG7_9ENTR rbh
iron-sulfur cluster binding protein
NECEvent2014_8_6_scaffold_75_trna_4
unknown

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comp(12061..12133)
DNA (73bp)
transferRNA
NECEvent2014_8_6_scaffold_75_trna_3
unknown

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comp(12172..12244)
DNA (73bp)
transferRNA
NECEvent2014_8_6_scaffold_75_trna_2
unknown

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comp(12284..12356)
DNA (73bp)
transferRNA
NECEvent2014_8_6_scaffold_75_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12567..13112)
DNA (546bp) protein (182aa)
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Oligoribonuclease n=9 Tax=Enterobacteriaceae RepID=Q1R395_ECOUT rbh
NECEvent2014_8_6_scaffold_75_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13207..14259
DNA (1053bp) protein (351aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
Putative ribosome biogenesis GTPase RsgA n=89 Tax=Escherichia RepID=RSGA_ECOBW rbh
rsgA; GTPase RsgA
NECEvent2014_8_6_scaffold_75_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14356..15324
DNA (969bp) protein (323aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=126899
Phosphatidylserine decarboxylase proenzyme n=1024 Tax=Enterobacteriaceae RepID=PSD_ECO24 rbh
NECEvent2014_8_6_scaffold_75_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15346..18669
DNA (3324bp) protein (1108aa)
Miniconductance mechanosensitive channel MscM n=198 Tax=Enterobacteriaceae RepID=MSCM_ECOLI rbh
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EFI87103.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
hypothetical protein
NECEvent2014_8_6_scaffold_75_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18698..19000)
DNA (303bp) protein (101aa)
Inner membrane protein YjeO n=225 Tax=Enterobacteriaceae RepID=YJEO_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS76422.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_75_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19009..19323)
DNA (315bp) protein (105aa)
Uncharacterized protein YjeN n=244 Tax=Enterobacteriaceae RepID=YJEN_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY08610.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_75_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19375..20877)
DNA (1503bp) protein (501aa)
Inner membrane transporter YjeM n=98 Tax=Enterobacteriaceae RepID=YJEM_ECOLI rbh
amino acid permease
Inner membrane transporter yjeM {ECO:0000313|EMBL:KDX88953.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_8_6_scaffold_75_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21096..22073)
DNA (978bp) protein (326aa)
yjeA; lysyl-tRNA synthetase (EC:6.1.1.6)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088906}; Short=EF-P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174};; EC=6.3.1.- {ECO:000
Elongation factor P--(R)-beta-lysine ligase n=14 Tax=Enterobacteriaceae RepID=C3SGA2_ECOLX rbh
NECEvent2014_8_6_scaffold_75_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22398..24206
DNA (1809bp) protein (603aa)
frdA; fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Fumarate reductase flavoprotein subunit {ECO:0000256|RuleBase:RU362050}; EC=1.3.5.4 {ECO:0000256|RuleBase:RU362050};; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
Fumarate reductase flavoprotein subunit n=596 Tax=Enterobacteriaceae RepID=FRDA_ECOLI rbh
NECEvent2014_8_6_scaffold_75_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24199..24933
DNA (735bp) protein (245aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
Fumarate reductase iron-sulfur subunit n=3 Tax=Escherichia coli RepID=F4SSM2_ECOLX rbh
fumarate reductase, iron-sulfur subunit
NECEvent2014_8_6_scaffold_75_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24944..25339
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=1251 Tax=Bacteria RepID=FRDC_ECO24
frdC; fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000313|EMBL:AFH14034.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_75_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25350..25709
DNA (360bp) protein (120aa)
Fumarate reductase subunit D n=991 Tax=Bacteria RepID=FRDD_ECO27
frdD; fumarate reductase, D subunit
Fumarate reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00709, ECO:0000256|SAAS:SAAS00096033}; Fumarate reductase 13 kDa hydrophobic protein {ECO:0000256|HAMAP-Rule:MF_00709}; TaxID=1444181 species="B
NECEvent2014_8_6_scaffold_75_24

Not on your lists

25772..26905
DNA (1134bp) protein (378aa)
Beta-lactamase (EC:3.5.2.6) rbh
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=663099 species="Bacteria.;" source="mixed culture bacterium AX_gF3SD01_04.;"
Beta-lactamase n=82 Tax=Bacteria RepID=AMPC_ECOLI rbh
NECEvent2014_8_6_scaffold_75_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26994..27527
DNA (534bp) protein (178aa)
Outer membrane lipoprotein Blc n=625 Tax=Bacteria RepID=BLC_ECO57 rbh
outer membrane lipoprotein Blc
Outer membrane lipoprotein Blc {ECO:0000313|EMBL:CDL28432.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_8_6_scaffold_75_26
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27524..27841)
DNA (318bp) protein (106aa)
Quaternary ammonium compound-resistance protein SugE n=1064 Tax=Enterobacteriaceae RepID=SUGE_ECO57
suppresser of groEL
Quaternary ammonium compound-resistance protein SugE {ECO:0000313|EMBL:AHE59562.1}; TaxID=1440052 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_8_6_scaffold_75_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28017..28163)
DNA (147bp) protein (49aa)
Entericidin B n=1424 Tax=Enterobacteriaceae RepID=ECNB_ECO57
ecnB; entericidin B membrane lipoprotein
Entericidin B {ECO:0000313|EMBL:EII21457.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.
Displaying items 1-30 of 45 in total

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