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NECEvent2014_8_6_scaffold_93

Alias: 178_006_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_93_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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254..880
DNA (627bp) protein (209aa)
Uncharacterized ferredoxin-like protein YdhY n=712 Tax=Enterobacteriaceae RepID=YDHY_ECO57 rbh
4Fe-4S ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:END91971.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_93_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

901..3003
DNA (2103bp) protein (701aa)
Aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Uncharacterized oxidoreductase YdhV n=115 Tax=Enterobacteriaceae RepID=YDHV_ECOLI rbh
Aldehyde ferredoxin oxidoreductase, domains 2 & 3 family protein {ECO:0000313|EMBL:KDY58905.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_8_6_scaffold_93_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3016..3654
DNA (639bp) protein (213aa)
Uncharacterized protein YdhW n=124 Tax=Escherichia coli RepID=YDHW_ECOLI rbh
ydhW; hypothetical protein rbh
Putative oxidoreductase {ECO:0000313|EMBL:KDX21157.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_93_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3718..4386
DNA (669bp) protein (223aa)
Uncharacterized ferredoxin-like protein YdhX n=312 Tax=Escherichia RepID=YDHX_ECOLI rbh
ydhX; 4Fe-4S ferredoxin
4Fe-4S ferredoxin {ECO:0000313|EMBL:EIL38366.1}; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O2
NECEvent2014_8_6_scaffold_93_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4383..5168
DNA (786bp) protein (262aa)
Protein PhsC homolog n=123 Tax=Escherichia RepID=PHSC_ECOLI rbh
ydhU; putative cytochrome
Prokaryotic cytochrome b561 family protein {ECO:0000313|EMBL:KDZ18048.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_6_scaffold_93_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5220..5984
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Escherichia coli MS 21-1 RepID=D8ABB0_ECOLX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KDZ18047.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_93_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5996..7600)
DNA (1605bp) protein (535aa)
Uncharacterized protein YdhS n=115 Tax=Escherichia RepID=YDHS_ECOLI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGI11282.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
ydhS; hypothetical protein
NECEvent2014_8_6_scaffold_93_8
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7726..8031)
DNA (306bp) protein (102aa)
Putative monooxygenase ydhR {ECO:0000313|EMBL:EIQ30141.1}; EC=1.-.-.- {ECO:0000313|EMBL:EIQ30141.1};; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Putative monooxygenase YdhR n=557 Tax=Enterobacteriaceae RepID=YDHR_ECOLI
hypothetical protein
NECEvent2014_8_6_scaffold_93_trna_2
unknown

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comp(8142..8215)
DNA (74bp)
transferRNA
NECEvent2014_8_6_scaffold_93_trna_1
unknown

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comp(8223..8296)
DNA (74bp)
transferRNA
NECEvent2014_8_6_scaffold_93_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8604..9860
DNA (1257bp) protein (419aa)
Uncharacterized protein YdhQ n=74 Tax=Escherichia RepID=YDHQ_ECOLI rbh
ydhQ; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EOU60479.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_93_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9901..11274)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=304 Tax=Escherichia RepID=MDTK_ECO27 rbh
mdtK; multidrug efflux system transporter NorM
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=1005550 species="Bacteria; Pro
NECEvent2014_8_6_scaffold_93_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11489..12130
DNA (642bp) protein (214aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EZK23032.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EZK23032.1};; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
Riboflavin synthase n=999 Tax=Enterobacteriaceae RepID=RISA_ECOLI rbh
NECEvent2014_8_6_scaffold_93_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12170..13318)
DNA (1149bp) protein (383aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Escherichia coli HVH 158 (4-3224287) RepID=T7IB69_ECOLX rbh
cyclopropane-fatty-acyl-phospholipid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ELE55638.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_6_scaffold_93_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13609..14820)
DNA (1212bp) protein (404aa)
Inner membrane transport protein ydhC n=470 Tax=Enterobacteriaceae RepID=A7ZMC6_ECO24 rbh
transporter
Transporter {ECO:0000313|EMBL:KDV65470.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2
NECEvent2014_8_6_scaffold_93_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14933..15865
DNA (933bp) protein (311aa)
Uncharacterized HTH-type transcriptional regulator YdhB n=728 Tax=Enterobacteriaceae RepID=YDHB_ECO57 rbh
ydhB; putative DNA-binding transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:ELI27310.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_93_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15862..16887)
DNA (1026bp) protein (342aa)
HTH-type transcriptional repressor PurR n=878 Tax=Enterobacteriaceae RepID=PURR_ECO55 rbh
purR; DNA-binding transcriptional repressor PurR
HTH-type transcriptional repressor PurR {ECO:0000256|HAMAP-Rule:MF_01277, ECO:0000256|SAAS:SAAS00011512}; Pur regulon repressor {ECO:0000256|HAMAP-Rule:MF_01277}; Purine nucleotide synthesis repressor
NECEvent2014_8_6_scaffold_93_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17186..17275
DNA (90bp) protein (30aa)
Uncharacterized protein ynhF n=1 Tax=Shigella dysenteriae 1617 RepID=E2XG18_SHIDY
Uncharacterized protein {ECO:0000313|EMBL:EZJ41361.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_8_6_scaffold_93_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17441..18610
DNA (1170bp) protein (390aa)
Inner membrane transport protein YdhP n=586 Tax=Enterobacteriaceae RepID=YDHP_ECOLI rbh
major facilitator superfamily MFS_1
Inner membrane transporter ydhP {ECO:0000313|EMBL:EOU90893.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_8_6_scaffold_93_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18845..19426)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Superoxide dismutase [Fe] n=1325 Tax=Bacteria RepID=SODF_ECO57 rbh
superoxide dismutase
NECEvent2014_8_6_scaffold_93_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19554..20369)
DNA (816bp) protein (272aa)
Murein DD-endopeptidase MepH n=421 Tax=Enterobacteriaceae RepID=MEPH_ECOLI rbh
ydhO; putative lipoprotein rbh
NlpC/P60 family protein {ECO:0000313|EMBL:EII46782.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_93_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20703..21050
DNA (348bp) protein (116aa)
Glutaredoxin-4 n=1432 Tax=Enterobacteriaceae RepID=GLRX4_ECO57
monothiol glutaredoxin protein
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC186
NECEvent2014_8_6_scaffold_93_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21101..25717)
DNA (4617bp) protein (1539aa)
Probable ATP-dependent helicase lhr n=81 Tax=Enterobacteriaceae RepID=LHR_ECOLI rbh
ATP-dependent helicase rbh
ATP-dependent helicase {ECO:0000313|EMBL:EOW15006.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_93_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25810..26457)
DNA (648bp) protein (216aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=749548 speci
Ribonuclease T n=125 Tax=Escherichia RepID=RNT_ECOLI rbh
rnt; ribonuclease T rbh
NECEvent2014_8_6_scaffold_93_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26560..26967)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=1116066 species="Bacteria; Proteobacteria; Ga
Lactoylglutathione lyase (Fragment) n=2 Tax=Escherichia coli RepID=E9TLV7_ECOLX
gloA; lactoylglutathione lyase
NECEvent2014_8_6_scaffold_93_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27048..28145)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase n=334 Tax=Escherichia RepID=NEMA_ECOLI rbh
nemA; N-ethylmaleimide reductase
Oxidoreductase, FAD/FMN dependent {ECO:0000313|EMBL:EII22940.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_6_scaffold_93_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28182..28781)
DNA (600bp) protein (200aa)
HTH-type transcriptional repressor NemR n=838 Tax=Enterobacteriaceae RepID=NEMR_ECOL6 rbh
TetR family transcriptional regulator
HTH-type transcriptional repressor nemR {ECO:0000313|EMBL:EQP55055.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_8_6_scaffold_93_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28884..29123
DNA (240bp) protein (80aa)
Uncharacterized protein YdhL n=350 Tax=Enterobacteriaceae RepID=YDHL_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB19022.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_93_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29172..30068
DNA (897bp) protein (299aa)
Oxidoreductase YdhF n=579 Tax=Enterobacteriaceae RepID=YDHF_ECOLI rbh
ydhF; putative oxidoreductase
Oxidoreductase ydhF {ECO:0000313|EMBL:EGP25063.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_6_scaffold_93_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30149..30670
DNA (522bp) protein (174aa)
sodC; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
Superoxide dismutase [Cu-Zn] n=893 Tax=Enterobacteriaceae RepID=SODC_ECO57 rbh
Displaying items 1-30 of 39 in total

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