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NECEvent2014_8_6_scaffold_107

Alias: 178_006_scaffold_107

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_107_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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50..2677
DNA (2628bp) protein (876aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
DNA gyrase subunit A n=348 Tax=Enterobacteriaceae RepID=GYRA_ECOLI rbh
gyrA; DNA gyrase subunit A
NECEvent2014_8_6_scaffold_107_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2826..4514
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Escherichia coli J53 RepID=I0ZUJ2_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:AFG41166.1}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
hypothetical protein
NECEvent2014_8_6_scaffold_107_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4511..5134
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli B185 RepID=D6IC38_ECOLX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESE01934.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_107_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5278..9672
DNA (4395bp) protein (1465aa)
UPF0192 protein yfaS n=24 Tax=Escherichia coli RepID=I4J3T5_ECOLX rbh
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:ESE01935.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
putative protease inhibitor
NECEvent2014_8_6_scaffold_107_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..11322
DNA (1650bp) protein (550aa)
Uncharacterized protein YfaQ n=100 Tax=Escherichia RepID=YFAQ_ECOLI rbh
Uncharacterized protein {ECO:0000313|EMBL:EOU58071.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_8_6_scaffold_107_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11327..12103
DNA (777bp) protein (259aa)
Uncharacterized protein YfaP n=168 Tax=Enterobacteriaceae RepID=YFAP_ECOLI rbh
yfaP; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KEN97324.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_107_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12177..13361)
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase n=115 Tax=Enterobacteriaceae RepID=ATOB_ECOLI rbh
atoB; acetyl-CoA acetyltransferase
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EFK89021.1}; TaxID=749540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_6_scaffold_107_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13392..14714)
DNA (1323bp) protein (441aa)
Short-chain fatty acids transporter n=314 Tax=Escherichia RepID=ATOE_ECOLI rbh
short chain fatty acid transporter
Short-chain fatty acids transporter {ECO:0000313|EMBL:END91218.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_8_6_scaffold_107_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14711..15361)
DNA (651bp) protein (217aa)
atoA; acetate CoA-transferase subunit beta (EC:2.8.3.8)
Acetate CoA-transferase subunit beta n=284 Tax=Enterobacteriaceae RepID=ATOA_ECOLI rbh
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EID67237.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_8_6_scaffold_107_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15361..16023)
DNA (663bp) protein (221aa)
Acetate CoA-transferase subunit alpha {ECO:0000313|EMBL:KEN89834.1}; EC=2.8.3.8 {ECO:0000313|EMBL:KEN89834.1};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Acetate CoA-transferase subunit alpha n=290 Tax=Enterobacteriaceae RepID=ATOD_ECOLI rbh
atoD; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha rbh
NECEvent2014_8_6_scaffold_107_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16219..17604)
DNA (1386bp) protein (462aa)
Acetoacetate metabolism regulatory protein AtoC n=232 Tax=Enterobacteriaceae RepID=ATOC_ECOLI rbh
acetoacetate metabolism regulatory protein AtoC
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EFJ87876.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_6_scaffold_107_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17601..19427)
DNA (1827bp) protein (609aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
sensory histidine kinase AtoS (EC:2.7.13.3)
Signal transduction histidine-protein kinase AtoS n=142 Tax=Bacteria RepID=ATOS_ECOLI rbh
NECEvent2014_8_6_scaffold_107_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19594..22443
DNA (2850bp) protein (950aa)
Sensor histidine kinase RcsC {ECO:0000256|HAMAP-Rule:MF_00979}; EC=2.7.13.3 {ECO:0000256|HAMAP-Rule:MF_00979};; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Sensor histidine kinase RcsC n=100 Tax=Escherichia RepID=RCSC_ECOLI rbh
rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN
NECEvent2014_8_6_scaffold_107_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22643..23293)
DNA (651bp) protein (217aa)
Transcriptional regulatory protein RcsB n=1388 Tax=Enterobacteriaceae RepID=RCSB_ECOLX rbh
rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and RcsD
Transcriptional regulatory protein RcsB {ECO:0000256|HAMAP-Rule:MF_00981}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_8_6_scaffold_107_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23310..25982)
DNA (2673bp) protein (891aa)
Phosphotransferase RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; EC=2.7.2.- {ECO:0000256|HAMAP-Rule:MF_00980};; Phosphotransfer intermediate RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; TaxID=1444179 species="Ba
Phosphotransferase RcsD n=94 Tax=Escherichia RepID=RCSD_ECOLI rbh
sensor-like histidine kinase YojN
NECEvent2014_8_6_scaffold_107_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26721..27824
DNA (1104bp) protein (368aa)
Outer membrane protein C n=108 Tax=Escherichia RepID=OMPC_ECOLI rbh
outer membrane protein C
Outer membrane protein C {ECO:0000313|EMBL:EII48822.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_107_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27936..28991
DNA (1056bp) protein (352aa)
Thiamine biosynthesis lipoprotein ApbE n=368 Tax=Escherichia RepID=APBE_ECO57 rbh
ApbE family lipoprotein rbh
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:KEN89827.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_8_6_scaffold_107_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29065..30129
DNA (1065bp) protein (355aa)
Bifunctional transcriptional activator/DNA repair enzyme Ada n=158 Tax=Escherichia RepID=ADA_ECOLI rbh
ada; fused DNA-binding transcriptional dual regulator / O6-methylguanine-DNA methyltransferase
Regulatory protein ada {ECO:0000313|EMBL:EIF83908.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_8_6_scaffold_107_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30129..30779
DNA (651bp) protein (217aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=93 Tax=Escherichia RepID=ALKB_ECOLI rbh
alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair protein)
Alkylated DNA repair protein AlkB {ECO:0000313|EMBL:KDU53641.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_8_6_scaffold_107_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30855..32498
DNA (1644bp) protein (548aa)
ABC transporter ATP-binding protein YojI n=155 Tax=Escherichia RepID=YOJI_ECOLI rbh
Cyclic peptide transporter {ECO:0000313|EMBL:EFJ64243.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
yojI; multidrug transporter membrane component/ATP-binding protein rbh
NECEvent2014_8_6_scaffold_107_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32716..34362
DNA (1647bp) protein (549aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000
Malate:quinone oxidoreductase n=107 Tax=Escherichia RepID=MQO_ECOLI rbh
mqo; malate:quinone oxidoreductase
Displaying 21 items

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