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NECEvent2014_8_6_scaffold_108

Alias: 178_006_scaffold_108

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_108_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1146)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE77 RepID=L3QYE6_ECOLX
hypothetical protein
Putative entS/YbdA MFS transporter {ECO:0000313|EMBL:KDZ38825.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_6_scaffold_108_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1477..2067)
DNA (591bp) protein (197aa)
Phenylacetic acid degradation protein PaaY n=130 Tax=Escherichia RepID=PAAY_ECOLI rbh
phenylacetic acid degradation protein PaaY
Phenylacetic acid degradation protein PaaY {ECO:0000313|EMBL:EMX21096.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_6_scaffold_108_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2049..2999)
DNA (951bp) protein (317aa)
Transcriptional repressor PaaX n=125 Tax=Escherichia RepID=PAAX_ECOLI rbh
paaX; DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive
Phenylacetic acid degradation operon negative regulatory protein PaaX {ECO:0000313|EMBL:KDY62953.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
NECEvent2014_8_6_scaffold_108_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3100..4413)
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=670890 species="Bacteria;
Phenylacetate-coenzyme A ligase n=196 Tax=Enterobacteriaceae RepID=PAAK_ECOLI rbh
phenylacetate-CoA ligase
NECEvent2014_8_6_scaffold_108_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4440..5645)
DNA (1206bp) protein (402aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.16) rbh
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase n=110 Tax=Enterobacteriaceae RepID=PAAJ_ECOLI rbh
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase {ECO:0000313|EMBL:AKA90442.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_8_6_scaffold_108_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5645..6067)
DNA (423bp) protein (141aa)
Acyl-coenzyme A thioesterase PaaI n=503 Tax=Escherichia RepID=PAAI_ECOLI
paaI; putative thioesterase
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EMU63119.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_6_scaffold_108_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6057..7439)
DNA (1383bp) protein (461aa)
3-hydroxyacyl-CoA dehydrogenase PaaC n=5 Tax=Escherichia coli RepID=G2AU97_ECOLX rbh
putative 3-hydroxybutyryl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase PaaC {ECO:0000313|EMBL:ESD99070.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_8_6_scaffold_108_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7486..8274)
DNA (789bp) protein (263aa)
1,2-epoxyphenylacetyl-CoA isomerase n=117 Tax=Escherichia RepID=PAAG_ECOLI rbh
paaB; phenylacetate degradation putative enoyl-CoA hydratase PaaB
Phenylacetate degradation probable enoyl-CoA hydratase PaaB {ECO:0000313|EMBL:EGI10988.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
NECEvent2014_8_6_scaffold_108_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8274..9041)
DNA (768bp) protein (256aa)
2,3-dehydroadipyl-CoA hydratase n=200 Tax=Enterobacteriaceae RepID=PAAF_ECOLI rbh
paaF; putative enoyl-CoA hydratase paaF
2,3-dehydroadipyl-CoA hydratase {ECO:0000313|EMBL:ETD60817.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_8_6_scaffold_108_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9038..10108)
DNA (1071bp) protein (357aa)
1,2-phenylacetyl-CoA epoxidase, subunit E n=83 Tax=Escherichia RepID=PAAE_ECOLI rbh
paaE; putative multicomponent oxygenase/reductase subunit
Phenylacetate-CoA oxygenase/reductase, PaaK subunit {ECO:0000313|EMBL:EQY25229.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_8_6_scaffold_108_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10116..10613)
DNA (498bp) protein (166aa)
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D n=99 Tax=Escherichia coli RepID=PAAD_ECOLI rbh
paaD; phenylacetyl-CoA oxygenase, gamma subunit of aheteromultimeric diiron oxygenase
Phenylacetate-CoA oxygenase, PaaJ subunit {ECO:0000313|EMBL:KEO12926.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_6_scaffold_108_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10628..11374)
DNA (747bp) protein (249aa)
1,2-phenylacetyl-CoA epoxidase, subunit C n=282 Tax=Enterobacteriaceae RepID=PAAC_ECOLI rbh
phenylacetate-CoA oxygenase subunit PaaI
Phenylacetic acid degradation protein paaC {ECO:0000313|EMBL:KDU49067.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_6_scaffold_108_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11383..11670)
DNA (288bp) protein (96aa)
1,2-phenylacetyl-CoA epoxidase, subunit B n=495 Tax=Enterobacteriaceae RepID=PAAB_ECOLI
phenylacetate-CoA oxygenase subunit PaaH
Phenylacetate-CoA oxygenase, PaaH subunit {ECO:0000313|EMBL:EII32333.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_8_6_scaffold_108_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11682..12611)
DNA (930bp) protein (310aa)
1,2-phenylacetyl-CoA epoxidase, subunit A n=109 Tax=Escherichia RepID=PAAA_ECOLI rbh
paaA; phenylacetate-CoA oxygenase subunit PaaA
Phenylacetic acid degradation protein paaA {ECO:0000313|EMBL:ELD71365.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_8_6_scaffold_108_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12896..14941
DNA (2046bp) protein (682aa)
Bifunctional protein PaaZ n=83 Tax=Bacteria RepID=PAAZ_ECOLI rbh
phenylacetic acid degradation protein paaN rbh
Fused aldehyde dehydrogenase/enoyl-CoA hydratase {ECO:0000313|EMBL:CBJ00965.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_8_6_scaffold_108_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15189..17459
DNA (2271bp) protein (757aa)
Primary amine oxidase n=97 Tax=Bacteria RepID=AMO_ECOLI rbh
tynA; Copper amine oxidase precursor
Amine oxidase {ECO:0000256|RuleBase:RU000672}; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6B
NECEvent2014_8_6_scaffold_108_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17518..19017)
DNA (1500bp) protein (500aa)
phenylacetaldehyde dehydrogenase (EC:1.2.1.39)
Phenylacetaldehyde dehydrogenase n=299 Tax=Enterobacteriaceae RepID=FEAB_ECOLI rbh
Phenylacetaldehyde dehydrogenase {ECO:0000313|EMBL:EOV63363.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_6_scaffold_108_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19253..20158
DNA (906bp) protein (302aa)
Transcriptional activator FeaR n=45 Tax=Enterobacteriaceae RepID=FEAR_ECOLI rbh
feaR; DNA-binding transcriptional activator FeaR
Transcriptional activator feaR {ECO:0000313|EMBL:CEE05845.1}; Transcriptional activator for tynA and feaB {ECO:0000313|EMBL:AKF55271.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteri
NECEvent2014_8_6_scaffold_108_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20330..20656)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Escherichia coli 2726950 RepID=N2L2B9_ECOLX
ydbL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ80459.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_108_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20664..20849)
DNA (186bp) protein (62aa)
Uncharacterized protein YnbE n=953 Tax=Enterobacteriaceae RepID=YNBE_ECOL6
ynbE; hypothetical protein
YnbE-like lipofamily protein {ECO:0000313|EMBL:KEJ77646.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_8_6_scaffold_108_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20846..23485)
DNA (2640bp) protein (880aa)
Uncharacterized protein YdbH n=74 Tax=Bacteria RepID=YDBH_ECOLI rbh
ydbH; hypothetical protein
Uncharacterized protein YdbH {ECO:0000313|EMBL:AKA90425.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_108_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23693..24682
DNA (990bp) protein (330aa)
D-lactate dehydrogenase n=175 Tax=Escherichia RepID=LDHD_ECOLI rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-lactate dehydrogenase {ECO:0000313|EMBL:CBJ00958.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_108_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24793..25215
DNA (423bp) protein (141aa)
Heat shock protein HslJ n=348 Tax=Enterobacteriaceae RepID=HSLJ_ECOLI
hypothetical protein
META domain protein {ECO:0000313|EMBL:EFJ83546.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M
NECEvent2014_8_6_scaffold_108_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25212..25478)
DNA (267bp) protein (89aa)
Uncharacterized protein YdbJ n=905 Tax=Enterobacteriaceae RepID=YDBJ_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV99351.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_108_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25752..29276
DNA (3525bp) protein (1175aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
Pyruvate-flavodoxin oxidoreductase n=105 Tax=Escherichia RepID=B7L5B5_ECO55 rbh
2-oxoacid-flavodoxin oxidoreductase
NECEvent2014_8_6_scaffold_108_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29643..30776
DNA (1134bp) protein (378aa)
Outer membrane protein N n=128 Tax=Escherichia RepID=OMPN_ECOLI rbh
porin
Outer membrane protein N {ECO:0000313|EMBL:EFI90433.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_108_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30917..31351
DNA (435bp) protein (145aa)
Universal stress protein F {ECO:0000313|EMBL:EDU62804.1}; EC=3.1.13.1 {ECO:0000313|EMBL:EDU62804.1};; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Universal stress protein F n=171 Tax=Escherichia RepID=USPF_ECOLI
hypothetical protein
NECEvent2014_8_6_scaffold_108_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31528..32463
DNA (936bp) protein (312aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=88 Tax=Escherichia RepID=F4M6J3_ECOLX rbh
ttcA; putative ATPase of the PP-loop superfamily implicated in cell cycle control rbh
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_8_6_scaffold_108_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32592..33965)
DNA (1374bp) protein (458aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
ATP-dependent RNA helicase DbpA n=146 Tax=Escherichia RepID=DBPA_ECOLI rbh
dbpA; ATP-dependent RNA helicase DbpA
NECEvent2014_8_6_scaffold_108_30
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33995..34168)
DNA (174bp) protein (58aa)
Uncharacterized protein n=609 Tax=Escherichia RepID=J7R0K2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELC19104.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia s
Displaying 30 items

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