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NECEvent2014_8_6_scaffold_112

Alias: 178_006_scaffold_112

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_112_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component; EC=1.2.4.1;; TaxID=1240777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. 11-03943.;"
Pyruvate dehydrogenase E1 component n=974 Tax=Enterobacteriaceae RepID=ODP1_ECO57
NECEvent2014_8_6_scaffold_112_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76..2739)
DNA (2664bp) protein (888aa)
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
NECEvent2014_8_6_scaffold_112_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2900..3664)
DNA (765bp) protein (255aa)
Pyruvate dehydrogenase complex repressor n=1421 Tax=Enterobacteriaceae RepID=PDHR_ECO57 rbh
pdhR; pdhR
Transcriptional repressor for pyruvate dehydrogenase complex {ECO:0000313|EMBL:AJA24032.1}; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_6_scaffold_112_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4208..5578
DNA (1371bp) protein (457aa)
Aromatic amino acid transport protein AroP n=390 Tax=Enterobacteriaceae RepID=AROP_ECOLI rbh
aroP; aromatic amino acid transporter
Aromatic amino acid transporter AroP {ECO:0000313|EMBL:BAI34114.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_8_6_scaffold_112_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5621..6475)
DNA (855bp) protein (285aa)
Protein AmpE n=458 Tax=Enterobacteriaceae RepID=AMPE_ECOLI rbh
ampE; inner membrane protein
Protein AmpE {ECO:0000313|EMBL:ELE05964.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;
NECEvent2014_8_6_scaffold_112_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6472..7023)
DNA (552bp) protein (184aa)
ampD; N-acetyl-anhydromuranmyl-L-alanine amidase (EC:3.5.1.28)
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD {ECO:0000313|EMBL:EMU66519.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EMU66519.1};; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD n=527 Tax=Enterobacteriaceae RepID=AMPD_ECOLI rbh
NECEvent2014_8_6_scaffold_112_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7111..8004
DNA (894bp) protein (298aa)
quinolinate phosphoribosyltransferase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EFK68678.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EFK68678.1};; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=457 Tax=Enterobacteriaceae RepID=NADC_ECOLI rbh
NECEvent2014_8_6_scaffold_112_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8207..8647
DNA (441bp) protein (147aa)
Prepilin peptidase-dependent protein D n=265 Tax=Enterobacteriaceae RepID=PPDD_ECOLI
ppdD; major pilin subunit
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EFK14371.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_6_scaffold_112_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8657..10042
DNA (1386bp) protein (462aa)
Protein transport protein HofB homolog n=135 Tax=Escherichia RepID=HOFB_ECOLI rbh
hofB; protein involved in plasmid replication
Protein transporter hofB {ECO:0000313|EMBL:ELE05960.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_112_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10032..11234
DNA (1203bp) protein (401aa)
Protein transport protein HofC homolog n=138 Tax=Escherichia RepID=HOFC_ECOLI rbh
hofC; assembly protein in type IV pilin biogenesis, transmembrane protein rbh
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:END97441.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_8_6_scaffold_112_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11269..12312)
DNA (1044bp) protein (348aa)
guaC; guanosine 5'-monophosphate oxidoreductase (EC:1.7.1.7)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_00596, ECO:0000256|RuleBase:RU003929}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_00596, ECO:0000256|RuleBase:RU003929};; Guanosine 5'-monophosphate oxidoreductase
GMP reductase n=815 Tax=Enterobacteriaceae RepID=GUAC_ECO27 rbh
NECEvent2014_8_6_scaffold_112_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12537..13157
DNA (621bp) protein (207aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1125642 species="Bacteria; P
Dephospho-CoA kinase n=822 Tax=Enterobacteriaceae RepID=COAE_ECO57 rbh
dephospho-CoA kinase
NECEvent2014_8_6_scaffold_112_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13157..13900
DNA (744bp) protein (248aa)
Cell division protein ZapD n=516 Tax=Enterobacteriaceae RepID=ZAPD_ECO55 rbh
hypothetical protein
Cell division protein ZapD {ECO:0000256|HAMAP-Rule:MF_01092, ECO:0000256|SAAS:SAAS00004483}; Z ring-associated protein D {ECO:0000256|HAMAP-Rule:MF_01092}; TaxID=1181739 species="Bacteria; Proteobacte
NECEvent2014_8_6_scaffold_112_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13910..14107
DNA (198bp) protein (66aa)
DNA gyrase inhibitor YacG n=1283 Tax=Enterobacteriaceae RepID=YACG_ECO24
yacG; DNA gyrase inhibitor
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_6_scaffold_112_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14323..14712)
DNA (390bp) protein (130aa)
Mutator mutT protein {ECO:0000313|EMBL:KDY21766.1}; EC=3.6.1.- {ECO:0000313|EMBL:KDY21766.1};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
8-oxo-dGTP diphosphatase n=113 Tax=Escherichia RepID=MUTT_ECOLI
mutT; nucleoside triphosphate pyrophosphohydrolase
NECEvent2014_8_6_scaffold_112_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14772..17477)
DNA (2706bp) protein (902aa)
Protein translocase subunit SecA n=327 Tax=Enterobacteriaceae RepID=SECA_ECO24 rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
preprotein translocase subunit SecA
NECEvent2014_8_6_scaffold_112_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17539..18126)
DNA (588bp) protein (196aa)
Secretion monitor n=190 Tax=Escherichia RepID=J7QWX6_ECOLX rbh
secretion monitor family proten
Secretion monitor {ECO:0000256|HAMAP-Rule:MF_01332}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_6_scaffold_112_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18282..19199)
DNA (918bp) protein (306aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1323 Tax=Enterobacteriaceae RepID=LPXC_ECO24 rbh
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC
NECEvent2014_8_6_scaffold_112_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19300..20451)
DNA (1152bp) protein (384aa)
Cell division protein FtsZ n=1359 Tax=Enterobacteriaceae RepID=FTSZ_ECO57 rbh
ftsZ; cell division protein
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_8_6_scaffold_112_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20512..21774)
DNA (1263bp) protein (421aa)
Cell division protein FtsA n=1359 Tax=Enterobacteriaceae RepID=FTSA_SHIFL rbh
ftsA; ATP-binding cell division protein involved in recruitment of FtsK to Z ring
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_112_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21771..22601)
DNA (831bp) protein (277aa)
Cell division protein FtsQ n=148 Tax=Bacteria RepID=FTSQ_ECOLI rbh
cell division protein FtsQ
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_8_6_scaffold_112_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22603..23523)
DNA (921bp) protein (307aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase B n=541 Tax=Enterobacteriaceae RepID=DDLB_ECOLI rbh
NECEvent2014_8_6_scaffold_112_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23516..24991)
DNA (1476bp) protein (492aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=180 Tax=Bacteria RepID=MURC_ECOBW rbh
UDP-N-acetylmuramate--L-alanine ligase rbh
NECEvent2014_8_6_scaffold_112_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25045..26112)
DNA (1068bp) protein (356aa)
murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=157 Tax=Escherichia RepID=MURG_ECOBW rbh
NECEvent2014_8_6_scaffold_112_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26109..27353)
DNA (1245bp) protein (415aa)
Lipid II flippase FtsW n=1340 Tax=Enterobacteriaceae RepID=FTSW_ECO57 rbh
cell division protein FtsW
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
NECEvent2014_8_6_scaffold_112_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27353..28669)
DNA (1317bp) protein (439aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=177 Tax=Enterobacteriaceae RepID=MURD_ECOLI rbh
NECEvent2014_8_6_scaffold_112_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28672..29754)
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=760 Tax=Enterobacteriaceae RepID=MRAY_ECO24 rbh
phospho-N-acetylmuramoyl-pentapeptide-transferase
NECEvent2014_8_6_scaffold_112_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29748..31106)
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteoba
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=80 Tax=cellular organisms RepID=MURF_ECOLI rbh
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
NECEvent2014_8_6_scaffold_112_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31103..32590)
DNA (1488bp) protein (496aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=106 Tax=Enterobacteriaceae RepID=A7ZW37_ECOHS rbh
NECEvent2014_8_6_scaffold_112_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32577..33170)
DNA (594bp) protein (198aa)
Transpeptidase involved in septal peptidoglycan synthesis (Penicillin-binding protein 3) n=1 Tax=Escherichia coli O127:H27 str. C43/90 RepID=M7WGU5_ECOLX
ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3)
Cell division protein FtsL {ECO:0000313|EMBL:EFK03900.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Displaying 30 items

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