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NECEvent2014_8_6_scaffold_145

Alias: 178_006_scaffold_145

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_145_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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61..2475
DNA (2415bp) protein (805aa)
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ENA41937.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ENA41937.1};; TaxID=1125641 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Formate dehydrogenase-O major subunit n=1337 Tax=Enterobacteriaceae RepID=FDOG_ECOLI rbh
fdoG; formate dehydrogenase-O, major subunit
NECEvent2014_8_6_scaffold_145_2
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2488..3390
DNA (903bp) protein (301aa)
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EJL10923.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EJL10923.1};; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
Formate dehydrogenase-O iron-sulfur subunit n=988 Tax=Enterobacteriaceae RepID=FDOH_ECOL6 rbh
formate dehydrogenase-O, iron-sulfur subunit
NECEvent2014_8_6_scaffold_145_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3387..4022
DNA (636bp) protein (212aa)
Formate dehydrogenase, cytochrome b556(fdo) subunit n=1311 Tax=Enterobacteriaceae RepID=FDOI_ECO57 rbh
formate dehydrogenase subunit gamma
Formate dehydrogenase {ECO:0000313|EMBL:KDV40390.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_8_6_scaffold_145_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4019..4948
DNA (930bp) protein (310aa)
Protein FdhE n=75 Tax=Escherichia RepID=FDHE_ECOBW rbh
fdhE; formate dehydrogenase formation protein rbh
Protein FdhE {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMN
NECEvent2014_8_6_scaffold_145_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5096..5278)
DNA (183bp) protein (61aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=131 Tax=Escherichia RepID=J7QY26_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX86261.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_145_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5278..5520)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3151-1 RepID=U0BXU2_ECOLX
yiiF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX34834.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_145_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5738..5956)
DNA (219bp) protein (73aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=J7QAU3_ECOLX
yiiE; putative transcriptional regulator
Ribbon-helix-helix , copG family protein {ECO:0000313|EMBL:KDY62281.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_8_6_scaffold_145_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6291..6398)
DNA (108bp) protein (36aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=97 Tax=Escherichia RepID=J7R8B4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW14206.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_145_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6809..7750)
DNA (942bp) protein (314aa)
putative acetyltransferase (EC:2.3.1.18)
Thioesterase domain protein n=5 Tax=Escherichia coli RepID=V0V5I2_ECOLX rbh
Acetyltransferase {ECO:0000313|EMBL:EQP99527.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HV
NECEvent2014_8_6_scaffold_145_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7795..8232)
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
D-tyrosyl-tRNA(Tyr) deacylase n=1314 Tax=Enterobacteriaceae RepID=DTD_ECO24
D-tyrosyl-tRNA(Tyr) deacylase
NECEvent2014_8_6_scaffold_145_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8229..9101)
DNA (873bp) protein (291aa)
UPF0761 membrane protein YihY n=1249 Tax=Bacteria RepID=YIHY_ECO24 rbh
yihY; tRNA-processing ribonuclease BN
UPF0761 membrane protein YihY {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_6_scaffold_145_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9095..9694)
DNA (600bp) protein (200aa)
Alpha-D-glucose-1-phosphate phosphatase YihX n=417 Tax=Enterobacteriaceae RepID=YIHX_ECOLI rbh
yihX; phosphatase
Phosphatase YihX {ECO:0000313|EMBL:EGU97288.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 7
NECEvent2014_8_6_scaffold_145_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9793..10578)
DNA (786bp) protein (262aa)
Uncharacterized HTH-type transcriptional regulator YihW n=829 Tax=Bacteria RepID=YIHW_ECOLI rbh
yihW; putative DNA-binding transcriptional regulator rbh
Putative glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:ESE02737.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_8_6_scaffold_145_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10612..11508)
DNA (897bp) protein (299aa)
Sulfofructose kinase {ECO:0000256|HAMAP-Rule:MF_00999}; Short=SF kinase {ECO:0000256|HAMAP-Rule:MF_00999};; EC=2.7.1.184 {ECO:0000256|HAMAP-Rule:MF_00999};; TaxID=1444123 species="Bacteria; Proteobact
Uncharacterized sugar kinase YihV n=305 Tax=Enterobacteriaceae RepID=YIHV_ECOLI rbh
PfkB domain-containing protein
NECEvent2014_8_6_scaffold_145_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11676..12572
DNA (897bp) protein (299aa)
3-sulfolactaldehyde reductase {ECO:0000256|HAMAP-Rule:MF_01913}; Short=SLA reductase {ECO:0000256|HAMAP-Rule:MF_01913};; EC=1.1.1.373 {ECO:0000256|HAMAP-Rule:MF_01913};; TaxID=749532 species="Bacteria
Uncharacterized oxidoreductase YihU n=206 Tax=Bacteria RepID=YIHU_ECOLI rbh
yihU; oxidoreductase with NAD(P)-binding Rossmann-fold domain
NECEvent2014_8_6_scaffold_145_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12596..13474
DNA (879bp) protein (293aa)
Sulfofructosephosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01912}; Short=SFP aldolase {ECO:0000256|HAMAP-Rule:MF_01912};; EC=4.1.2.57 {ECO:0000256|HAMAP-Rule:MF_01912};; TaxID=1446580 species="Bacteri
Uncharacterized aldolase YihT n=383 Tax=Bacteria RepID=YIHT_ECOLI rbh
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
NECEvent2014_8_6_scaffold_145_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13491..14732
DNA (1242bp) protein (414aa)
Sulfoquinovose isomerase {ECO:0000256|HAMAP-Rule:MF_00998}; Short=SQ isomerase {ECO:0000256|HAMAP-Rule:MF_00998};; EC=5.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00998};; TaxID=1268985 species="Bacteria; Prot
Uncharacterized sugar isomerase YihS n=342 Tax=Enterobacteriaceae RepID=YIHS_ECOLI rbh
N-acylglucosamine 2-epimerase
NECEvent2014_8_6_scaffold_145_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14846..15532
DNA (687bp) protein (229aa)
Uncharacterized protein YihR n=106 Tax=cellular organisms RepID=YIHR_ECOLI rbh
aldose-1-epimerase
Aldose-1-epimerase {ECO:0000313|EMBL:EOW14096.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli K
NECEvent2014_8_6_scaffold_145_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15972..18008
DNA (2037bp) protein (679aa)
Alpha-glucosidase YihQ n=95 Tax=Escherichia RepID=YIHQ_ECOLI rbh
yihQ; alpha-glucosidase
Glycosyl hydrolases 31 family protein {ECO:0000313|EMBL:KEJ64973.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_8_6_scaffold_145_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18054..19439
DNA (1386bp) protein (462aa)
Inner membrane symporter YihP n=99 Tax=Escherichia RepID=YIHP_ECOLI rbh
sugar (Glycoside-Pentoside-Hexuronide) transporter
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EFJ65757.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_8_6_scaffold_145_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19482..20885
DNA (1404bp) protein (468aa)
Uncharacterized symporter YihO n=94 Tax=Escherichia RepID=YIHO_ECOLI rbh
yihO; predited transporter
Inner membrane symporter yihP {ECO:0000313|EMBL:CEE08095.1}; Putative sulfoquinovose importer {ECO:0000313|EMBL:AKF57608.1}; Putative symporter YihO {ECO:0000313|EMBL:KGM76517.1}; Sugar transporter {E
NECEvent2014_8_6_scaffold_145_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20953..21645
DNA (693bp) protein (231aa)
Porin OmpL n=108 Tax=Escherichia RepID=OMPL_ECOLI rbh
ompL; predicted outer membrane porin L
Porin ompL {ECO:0000313|EMBL:KDY62267.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_
NECEvent2014_8_6_scaffold_145_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21736..23001)
DNA (1266bp) protein (422aa)
Inner membrane protein YihN n=129 Tax=Enterobacteriaceae RepID=YIHN_ECOLI rbh
yihN; predicted transporter rbh
Inner membrane protein yihN {ECO:0000313|EMBL:KEJ64969.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_145_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23103..24083)
DNA (981bp) protein (327aa)
Uncharacterized protein YihM n=235 Tax=Enterobacteriaceae RepID=YIHM_ECOLI rbh
yihM; sugar phosphate isomerase
AP endonuclease, family 2 {ECO:0000313|EMBL:ESD16114.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_145_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24091..24801)
DNA (711bp) protein (237aa)
Uncharacterized HTH-type transcriptional regulator YihL n=523 Tax=Enterobacteriaceae RepID=YIHL_ECO57 rbh
yihL; putative DNA-binding transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EGU97274.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_8_6_scaffold_145_26
Trichuris trichiura, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

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comp(25018..26841)
DNA (1824bp) protein (608aa)
GTP-binding protein TypA/BipA n=1322 Tax=Enterobacteriaceae RepID=TYPA_ECO27 rbh
GTP binding protein TypA {ECO:0000313|EMBL:CDW58729.1}; TaxID=36087 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" source="Trichuris
yihK; GTP-binding protein
Displaying 26 items

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