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NECEvent2014_8_6_scaffold_161

Alias: 178_006_scaffold_161

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_161_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2189)
DNA (2187bp) protein (729aa)
Lambda family phage tail tape measure protein n=1 Tax=Escherichia coli KTE44 RepID=L2Z8C0_ECOLX rbh
Lambda family phage tail tape measure protein {ECO:0000313|EMBL:EQX55228.1}; TaxID=1281204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
Minor tail protein precursor H
NECEvent2014_8_6_scaffold_161_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2170..2583)
DNA (414bp) protein (138aa)
Phage tail assembly protein T n=461 Tax=Enterobacteriaceae RepID=B2TZ75_SHIB3
tail component of prophage CP-933R
Phage minor tail protein {ECO:0000313|EMBL:CBG34191.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_161_3
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2610..3041)
DNA (432bp) protein (144aa)
Phage minor tail protein G n=186 Tax=Enterobacteriaceae RepID=B2TZ74_SHIB3
phage minor tail protein G
Phage minor tail protein G {ECO:0000313|EMBL:EDS90029.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_161_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3055..3807)
DNA (753bp) protein (251aa)
Major tail protein V n=244 Tax=Enterobacteriaceae RepID=B2TZ73_SHIB3 rbh
major tail protein
Major tail protein V {ECO:0000313|EMBL:AFS73999.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_6_scaffold_161_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3815..4210)
DNA (396bp) protein (132aa)
Phage minor tail protein U n=470 Tax=Enterobacteriaceae RepID=B2TW01_SHIB3
minor tail protein
Minor tail protein U {ECO:0000313|EMBL:EOV77615.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_6_scaffold_161_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4207..4740)
DNA (534bp) protein (178aa)
Prophage minor tail protein Z (GPZ) n=117 Tax=Enterobacteriaceae RepID=B2U0C9_SHIB3 rbh
putative minor tail protein
Phage minor tail protein {ECO:0000313|EMBL:EOU51631.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_161_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4756..5109)
DNA (354bp) protein (118aa)
Phage Head-Tail Attachment n=177 Tax=Enterobacteriaceae RepID=B2U033_SHIB3
prophage head-tail joining protein
Tail attachment protein {ECO:0000313|EMBL:KJW39181.1}; Tail attachment protein (Minor capsid protein FII) {ECO:0000313|EMBL:CKI11691.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteri
NECEvent2014_8_6_scaffold_161_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5102..5485)
DNA (384bp) protein (128aa)
Uncharacterized protein n=115 Tax=Escherichia RepID=B7L471_ECO55
phage protein
Uncharacterized protein {ECO:0000313|EMBL:EIH81053.1}; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_161_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5537..6565)
DNA (1029bp) protein (343aa)
Phage major capsid protein E n=124 Tax=Escherichia RepID=D5D1N8_ECOKI rbh
phage major capsid protein E
Head protein {ECO:0000313|EMBL:EZD23664.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM
NECEvent2014_8_6_scaffold_161_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6623..6970)
DNA (348bp) protein (116aa)
Head decoration protein (GpD) (Major capsid protein D) n=5 Tax=Escherichia coli RepID=B7L469_ECO55
Head decoration protein (gpD) (Major capsid protein D)
Chromosome, complete genome {ECO:0000313|EMBL:CAU97252.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_8_6_scaffold_161_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..8512)
DNA (1506bp) protein (502aa)
sppA_2; Protease 4 (EC:3.4.21.-) rbh
Head-tail preconnector protein GP5 n=28 Tax=Enterobacteriaceae RepID=B2U029_SHIB3 rbh
Putative capsid assembly protein of prophage {ECO:0000313|EMBL:ABE06978.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_8_6_scaffold_161_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8502..10094)
DNA (1593bp) protein (531aa)
Phage portal protein, lambda family n=48 Tax=Enterobacteriaceae RepID=B2U028_SHIB3 rbh
Capsid protein of prophage {ECO:0000313|EMBL:CKI08896.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
phage portal protein, lambda family rbh
NECEvent2014_8_6_scaffold_161_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10091..10297)
DNA (207bp) protein (69aa)
GpW n=600 Tax=Enterobacteriaceae RepID=B2TZ64_SHIB3
Phage head-to-tail joining protein
Head-stabilizing protein {ECO:0000313|EMBL:ELE57033.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_161_14
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10281..12209)
DNA (1929bp) protein (643aa)
Phage terminase large subunit (GpA) n=22 Tax=Enterobacteriaceae RepID=B2U026_SHIB3 rbh
Phage terminase large subunit (GpA) {ECO:0000313|EMBL:ACD06619.1}; TaxID=344609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shige
DNA packaging protein of prophage; terminase large subunit
NECEvent2014_8_6_scaffold_161_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12181..12729)
DNA (549bp) protein (183aa)
P21 prophage-derived terminase small subunit n=2 Tax=Escherichia coli RepID=T6YWG3_ECOLX rbh
prophage Qin DNA packaging protein NU1-like protein
Prophage Qin DNA packaging protein NU1-like protein {ECO:0000313|EMBL:ABE06974.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
NECEvent2014_8_6_scaffold_161_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13140..14207
DNA (1068bp) protein (356aa)
Uncharacterized protein n=13 Tax=Enterobacteriaceae RepID=B1ES00_9ESCH rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ89309.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
hypothetical protein rbh
NECEvent2014_8_6_scaffold_161_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14149..14769)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Escherichia RepID=L3X1T8_ECOLX rbh
phage regulatory protein
Chromosome, complete genome {ECO:0000313|EMBL:CAU97244.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_8_6_scaffold_161_18
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15186..15644)
DNA (459bp) protein (153aa)
Rz; Endopeptidase (Lysis protein Rz) (EC:3.1.3.16)
Bacteriophage lysis protein n=5 Tax=Escherichia RepID=B1ES03_9ESCH
Bacteriophage lysis protein {ECO:0000313|EMBL:EDS90044.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_8_6_scaffold_161_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15641..16174)
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Lysozyme n=13 Tax=Enterobacteriaceae RepID=I0V9J9_SHIFL rbh
ydfQ; membrane-associated lysozyme; Qin prophage
NECEvent2014_8_6_scaffold_161_20
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16230..16544)
DNA (315bp) protein (105aa)
Uncharacterized protein n=5 Tax=Escherichia RepID=G2B8L3_ECOLX
Hypothetical bacteriophage protein {ECO:0000313|EMBL:EDS90027.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
hypothetical protein
NECEvent2014_8_6_scaffold_161_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16549..16764)
DNA (216bp) protein (72aa)
Lysis protein S homolog from lambdoid prophage n=281 Tax=root RepID=B7LES1_ECO55
essD; phage lysis protein S; DLP12 prophage
Lysis S family protein {ECO:0000313|EMBL:EHU21816.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_8_6_scaffold_161_22
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16915..18771)
DNA (1857bp) protein (619aa)
YjhS n=67 Tax=Escherichia RepID=B1ES07_9ESCH rbh
YjhS {ECO:0000313|EMBL:EDS90017.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (strain TW07
hypothetical protein rbh
NECEvent2014_8_6_scaffold_161_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19032..19367
DNA (336bp) protein (112aa)
Anti-adapter protein IraM n=234 Tax=Enterobacteriaceae RepID=IRAM_ECO27
anti-adapter protein IraM
Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_6_scaffold_161_trna_2
unknown

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comp(20318..20391)
DNA (74bp)
transferRNA
NECEvent2014_8_6_scaffold_161_trna_1
unknown

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comp(20404..20476)
DNA (73bp)
transferRNA
NECEvent2014_8_6_scaffold_161_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20526..20840)
DNA (315bp) protein (105aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
DNA adenine methyltransferase n=1 Tax=Escherichia coli KTE44 RepID=L2ZBQ1_ECOLX
DNA adenine methyltransferase ( DNA methylase) from phage origin
NECEvent2014_8_6_scaffold_161_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20844..21575)
DNA (732bp) protein (244aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Phage DNA adenine-methylase n=28 Tax=Enterobacteriaceae RepID=D3H2S4_ECO44 rbh
phage DNA adenine-methylase
NECEvent2014_8_6_scaffold_161_26
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21726..21923)
DNA (198bp) protein (66aa)
Uncharacterized protein n=4 Tax=Escherichia RepID=B1ES12_9ESCH
Uncharacterized protein {ECO:0000313|EMBL:EDS90047.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia al
hypothetical protein
NECEvent2014_8_6_scaffold_161_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22150..22971)
DNA (822bp) protein (274aa)
Antitermination protein n=8 Tax=Escherichia coli RepID=D7XIB5_ECOLX rbh
Antitermination protein {ECO:0000313|EMBL:EFU33715.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
phage antitermination protein
NECEvent2014_8_6_scaffold_161_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22968..23342)
DNA (375bp) protein (125aa)
Crossover junction endodeoxyribonuclease rusA {ECO:0000256|PIRNR:PIRNR001007}; EC=3.1.22.4 {ECO:0000256|PIRNR:PIRNR001007};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enter
Crossover junction endodeoxyribonuclease rusA n=42 Tax=Escherichia coli RepID=J9ZN74_ECO14
holliday junction resolvase
Displaying items 1-30 of 32 in total

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