ggKbase home page

NECEvent2014_8_6_scaffold_198

Alias: 178_006_scaffold_198

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_198_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

380..655
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Escherichia coli MS 115-1 RepID=D7Y3I4_ECOLX
hypothetical protein
Putative outer membrane protein {ECO:0000313|EMBL:EGI18471.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_8_6_scaffold_198_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..1470)
DNA (687bp) protein (229aa)
L-ribulose-5-phosphate 4-epimerase UlaF {ECO:0000256|HAMAP-Rule:MF_01952}; EC=5.1.3.4 {ECO:0000256|HAMAP-Rule:MF_01952};; L-ascorbate utilization protein F {ECO:0000256|HAMAP-Rule:MF_01952}; Phosphori
ulaF; L-ribulose-5-phosphate 4-epimerase (L-ascorbate utilization protein F) (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase UlaF n=126 Tax=Escherichia RepID=B2N1C3_ECOLX rbh
NECEvent2014_8_6_scaffold_198_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1470..2324)
DNA (855bp) protein (285aa)
L-ribulose-5-phosphate 3-epimerase UlaE {ECO:0000256|HAMAP-Rule:MF_01951}; EC=5.1.3.22 {ECO:0000256|HAMAP-Rule:MF_01951};; L-ascorbate utilization protein E {ECO:0000256|HAMAP-Rule:MF_01951}; L-xylulo
L-ribulose-5-phosphate 3-epimerase UlaE n=445 Tax=Escherichia RepID=ULAE_ECO24 rbh
ulaE; L-xylulose 5-phosphate 3-epimerase UlaE
NECEvent2014_8_6_scaffold_198_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2334..2984)
DNA (651bp) protein (217aa)
3-keto-L-gulonate-6-phosphate decarboxylase UlaD {ECO:0000256|HAMAP-Rule:MF_01267}; EC=4.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01267};; 3-dehydro-L-gulonate-6-phosphate decarboxylase {ECO:0000256|HAMAP-Ru
3-keto-L-gulonate-6-phosphate decarboxylase UlaD n=997 Tax=Enterobacteriaceae RepID=ULAD_ECO24 rbh
ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase
NECEvent2014_8_6_scaffold_198_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2998..3462)
DNA (465bp) protein (155aa)
Ascorbate-specific phosphotransferase enzyme IIA component n=742 Tax=Enterobacteriaceae RepID=ULAC_SHIBS rbh
putative PTS IIA-like nitrogen-regulatory protein PtsN
L-ascorbate-specific enzyme IIA component of PTS {ECO:0000313|EMBL:EID69123.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_8_6_scaffold_198_6
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3472..3777)
DNA (306bp) protein (102aa)
PTS system L-ascorbate-specific transporter subunit IIB (EC:2.7.1.69)
Ascorbate-specific phosphotransferase enzyme IIB component n=1024 Tax=Enterobacteriaceae RepID=ULAB_ECO57
PTS system L-ascorbate-specific transporter subunit IIB {ECO:0000313|EMBL:ELL68527.1}; TaxID=702978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmo
NECEvent2014_8_6_scaffold_198_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3793..5190)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=366 Tax=Escherichia RepID=B6I298_ECOSE rbh
ulaA; PTS system ascorbate-specific transporter subunit IIC rbh
PTS system ascorbate-specific transporter subunit IIC {ECO:0000313|EMBL:AFS76389.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_8_6_scaffold_198_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5545..6609
DNA (1065bp) protein (355aa)
Probable L-ascorbate-6-phosphate lactonase UlaG {ECO:0000256|HAMAP-Rule:MF_01266}; EC=3.1.1.- {ECO:0000256|HAMAP-Rule:MF_01266};; L-ascorbate utilization protein G {ECO:0000256|HAMAP-Rule:MF_01266}; T
Uncharacterized protein n=167 Tax=Escherichia RepID=D7YDR4_ECOLX rbh
L-ascorbate 6-phosphate lactonase rbh
NECEvent2014_8_6_scaffold_198_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6717..7472
DNA (756bp) protein (252aa)
HTH-type transcriptional regulator UlaR n=1288 Tax=Enterobacteriaceae RepID=ULAR_ECO24 rbh
ulaR; DNA-binding transcriptional dual regulator
HTH-type transcriptional regulator UlaR {ECO:0000256|HAMAP-Rule:MF_01563}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_8_6_scaffold_198_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7469..8218)
DNA (750bp) protein (250aa)
Esterase yjfP {ECO:0000313|EMBL:KDY97394.1}; EC=3.1.-.- {ECO:0000313|EMBL:KDY97394.1};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Uncharacterized protein n=61 Tax=Escherichia RepID=D8C1V4_ECOLX rbh
yjfP; esterase
NECEvent2014_8_6_scaffold_198_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8400..8729
DNA (330bp) protein (110aa)
Lipoprotein BsmA n=169 Tax=Escherichia RepID=BSMA_ECOLI
yjfO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO05224.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_198_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8878..9153
DNA (276bp) protein (92aa)
Uncharacterized protein YjfN n=1370 Tax=Enterobacteriaceae RepID=YJFN_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ43071.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_198_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9270..10895)
DNA (1626bp) protein (542aa)
Acyl-CoA dehydrogenase domain protein n=136 Tax=Escherichia RepID=B1IT19_ECOLC rbh
Acyl-CoA dehydrogenase, N-terminal domain protein {ECO:0000313|EMBL:EFK27447.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
aidB; isovaleryl CoA dehydrogenase
NECEvent2014_8_6_scaffold_198_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10979..12142)
DNA (1164bp) protein (388aa)
Glutathionylspermidine synthase n=136 Tax=Escherichia RepID=B1IT20_ECOLC rbh
yjfC; putative synthetase/amidase
Glutathionylspermidine synthase preATP-grasp family protein {ECO:0000313|EMBL:KDY65237.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_6_scaffold_198_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12145..12783)
DNA (639bp) protein (213aa)
Uncharacterized protein n=129 Tax=Escherichia RepID=E3PE53_ECOH1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EOV73111.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_198_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12793..13191)
DNA (399bp) protein (133aa)
UPF0719 inner membrane protein YjfL n=926 Tax=Enterobacteriaceae RepID=YJFL_ECO57
yjfL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU34180.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_198_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13209..13868)
DNA (660bp) protein (220aa)
Uncharacterized protein YjfK n=137 Tax=Escherichia RepID=YJFK_ECOLI rbh
yjfK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO20572.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_198_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13919..14617)
DNA (699bp) protein (233aa)
Uncharacterized protein YjfJ n=895 Tax=Enterobacteriaceae RepID=YJFJ_ECOL6 rbh
yjfJ; putative transcriptional regulator effector protein
Putative alpha helical protein {ECO:0000313|EMBL:EGI52583.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_6_scaffold_198_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14636..15037)
DNA (402bp) protein (134aa)
Uncharacterized protein YjfI n=380 Tax=Escherichia RepID=YJFI_ECO57
yjfI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX88975.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_198_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15164..15895)
DNA (732bp) protein (244aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1351 Tax=Enterobacteriaceae RepID=RLMB_ECO57 rbh
yjfH; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB
NECEvent2014_8_6_scaffold_198_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16075..18516)
DNA (2442bp) protein (814aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1050617 species="Bacteria; Proteobacteria; Gam
exoribonuclease R (EC:3.1.13.1) rbh
Ribonuclease R n=116 Tax=Escherichia RepID=RNR_ECOLI rbh
NECEvent2014_8_6_scaffold_198_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18555..18980)
DNA (426bp) protein (142aa)
HTH-type transcriptional repressor NsrR n=1034 Tax=Enterobacteriaceae RepID=NSRR_ECO27
HTH-type transcriptional repressor NsrR {ECO:0000256|SAAS:SAAS00010440}; Flags: Fragment;; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
yjeB; transcriptional repressor NsrR
NECEvent2014_8_6_scaffold_198_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19185..20483)
DNA (1299bp) protein (433aa)
purA; PurA, subunit of adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1229 Tax=Bacteria RepID=PURA_ECO24 rbh
Displaying 23 items

View Taxonomy