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NECEvent2014_8_6_scaffold_227

Alias: 178_006_scaffold_227

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_227_1
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..91)
DNA (90bp) protein (30aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
Guanylate kinase n=1157 Tax=Enterobacteriaceae RepID=KGUA_ECOL5
NECEvent2014_8_6_scaffold_227_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(146..769)
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase
NECEvent2014_8_6_scaffold_227_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1027..2709
DNA (1683bp) protein (561aa)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B
DNA ligase B n=42 Tax=Escherichia RepID=LIGB_ECOBW rbh
hypothetical protein
NECEvent2014_8_6_scaffold_227_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2706..3323)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli M863 RepID=E9YW54_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ83007.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_227_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3614..4438)
DNA (825bp) protein (275aa)
DNA-damage-inducible protein D n=28 Tax=Bacteria RepID=DIND_ECOLI rbh
dinD; DNA-damage-inducible protein
DNA damage-inducible protein {ECO:0000313|EMBL:AJF58452.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_227_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5188..5478)
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=G0F5S4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AEJ58466.1}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_227_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6178..8016)
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli LT-68 RepID=E7I815_ECOLX rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFZ58876.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
RNA helicase
NECEvent2014_8_6_scaffold_227_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7997..9040)
DNA (1044bp) protein (348aa)
Toprim domain protein n=1 Tax=Escherichia coli STEC_S1191 RepID=G2CQF1_ECOLX rbh
Putative topoisomerase {ECO:0000313|EMBL:EHX26207.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
hypothetical protein
NECEvent2014_8_6_scaffold_227_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9033..9347)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=G0F5R9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AEJ58461.1}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_227_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9340..9945)
DNA (606bp) protein (202aa)
Ash family protein n=1 Tax=Escherichia coli 9.0111 RepID=I2WAP0_ECOLX rbh
Ash family protein {ECO:0000313|EMBL:EII21718.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.
CI repressor
NECEvent2014_8_6_scaffold_227_11
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9967..10173)
DNA (207bp) protein (69aa)
Conserved domain protein n=7 Tax=Enterobacteriaceae RepID=B1EIE3_9ESCH
Conserved domain protein {ECO:0000313|EMBL:EDS93108.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia a
prophage CP4-57 transcriptional regulator protein, AlpA family
NECEvent2014_8_6_scaffold_227_12
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10342..11301)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Escherichia RepID=B1EIE4_9ESCH rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS93047.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia al
NECEvent2014_8_6_scaffold_227_13
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11397..12668)
DNA (1272bp) protein (424aa)
Phage integrase n=5 Tax=Escherichia RepID=B1EIE5_9ESCH rbh
Phage integrase {ECO:0000313|EMBL:EDS92988.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (
integrase
NECEvent2014_8_6_scaffold_227_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12856..13719)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE71 RepID=S1DYA2_ECOLX rbh
yicC; Protein YicC rbh
Protein YicC {ECO:0000313|EMBL:AHY73106.1}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H2
NECEvent2014_8_6_scaffold_227_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13846..14562
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=25 Tax=Escherichia coli RepID=B2N6G7_ECOLX rbh
rph; ribonuclease PH
NECEvent2014_8_6_scaffold_227_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14628..15269
DNA (642bp) protein (214aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=705 Tax=Enterobacteriaceae RepID=PYRE_ECO27 rbh
NECEvent2014_8_6_scaffold_227_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15306..15902)
DNA (597bp) protein (199aa)
Nucleoid occlusion factor SlmA n=1019 Tax=Enterobacteriaceae RepID=SLMA_ECO24 rbh
slmA; division inhibitor protein
Nucleoid occlusion factor SlmA {ECO:0000256|HAMAP-Rule:MF_01839, ECO:0000256|SAAS:SAAS00010477}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_8_6_scaffold_227_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16009..16467)
DNA (459bp) protein (153aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Escherichia coli KTE14 RepID=S0V2V1_ECOLX rbh
NECEvent2014_8_6_scaffold_227_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16445..17665)
DNA (1221bp) protein (407aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EMV52559.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EMV52559.1};; TaxID=1116032 species="Bacteria; Proteobacte
Coenzyme A biosynthesis bifunctional protein CoaBC n=755 Tax=Enterobacteriaceae RepID=COABC_ECOL6 rbh
NECEvent2014_8_6_scaffold_227_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17837..18505
DNA (669bp) protein (223aa)
UPF0758 protein YicR n=32 Tax=Escherichia coli RepID=YICR_ECOBW rbh
yicR; hypothetical protein rbh
UPF0758 protein YicR {ECO:0000255|HAMAP-Rule:MF_00018}; TaxID=316385 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 20 items

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