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NECEvent2014_8_6_scaffold_615

Alias: 178_006_scaffold_615

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_615_1

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1..285
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli O25b:H4-ST131 str. EC958 RepID=N1N6Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ45366.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_8_6_scaffold_615_trna_1
unknown

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22..95
DNA (74bp)
transferRNA
NECEvent2014_8_6_scaffold_615_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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261..1064
DNA (804bp) protein (268aa)
2,5-diketo-D-gluconic acid reductase B n=258 Tax=Enterobacteriaceae RepID=DKGB_ECOLI rbh
2,5-diketo-D-gluconic acid reductase B DkgB
2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:ELE05293.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_8_6_scaffold_615_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1061..1975)
DNA (915bp) protein (305aa)
Uncharacterized HTH-type transcriptional regulator YafC n=161 Tax=Enterobacteriaceae RepID=YAFC_ECOLI rbh
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDX83015.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_615_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2237..3016
DNA (780bp) protein (260aa)
UPF0294 protein YafD n=2 Tax=Escherichia coli RepID=E9Z253_ECOLX rbh
yafD; hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_615_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3020..3643
DNA (624bp) protein (208aa)
Uncharacterized protein YafE n=117 Tax=Enterobacteriaceae RepID=YAFE_ECOLI rbh
type 11 methyltransferase
Methyltransferase domain protein {ECO:0000313|EMBL:EZK04184.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_8_6_scaffold_615_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3691..5049)
DNA (1359bp) protein (453aa)
Membrane-bound lytic murein transglycosylase D n=966 Tax=Enterobacteriaceae RepID=MLTD_ECOL6 rbh
mltD; membrane-bound lytic murein transglycosylase D
Membrane-bound lytic murein transglycosylase D (Murein hydrolase D) (Regulatory protein DniR) {ECO:0000313|EMBL:EGI47706.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
NECEvent2014_8_6_scaffold_615_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5121..5876)
DNA (756bp) protein (252aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=346 Tax=Escherichia RepID=GLO2_ECO57 rbh
gloB; hydroxyacylglutathione hydrolase GloB
NECEvent2014_8_6_scaffold_615_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5910..6632
DNA (723bp) protein (241aa)
Methyltransferase domain protein {ECO:0000313|EMBL:CEE09759.1}; EC=2.1.1.- {ECO:0000313|EMBL:CEE09759.1};; Protein YafS {ECO:0000313|EMBL:KGM67802.1}; Putative S-adenosyl-L-methionine-dependent methyl
Uncharacterized protein YafS n=129 Tax=Escherichia RepID=YAFS_ECOLI rbh
hypothetical protein rbh
NECEvent2014_8_6_scaffold_615_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6629..7096)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=7 Tax=Enterobacteriaceae RepID=D2AIY9_SHIF2 rbh
ribonuclease HI RnhA
NECEvent2014_8_6_scaffold_615_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7152..7892
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=40 Tax=Enterobacteriaceae RepID=B1LHM4_ECOSM rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EQY69660.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_6_scaffold_615_trna_2
unknown

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8025..8098
DNA (74bp)
transferRNA
Displaying 12 items

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