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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_1494 178_007_scaffold_1494
Genus: Clostridium (50%)
8 3843 bp 27.76 9.29 70.41
NECEvent2014_8_7_scaffold_6600 178_007_scaffold_6600
Species: Clostridium sp. IBUN125C (100%)
1 1033 bp 29.33 10.45 70.57
NECEvent2014_8_7_scaffold_4872 178_007_scaffold_4872
Species: Clostridium sp. IBUN13A (100%)
1 1339 bp 29.13 8.51 70.58
NECEvent2014_8_7_scaffold_2425 178_007_scaffold_2425
Species: Clostridium sp. IBUN125C (50%)
2 2403 bp 29.34 12.11 70.66
NECEvent2014_8_7_scaffold_2860 178_007_scaffold_2860
Species: Clostridium sp. IBUN22A (50%)
2 2090 bp 26.41 7.32 70.91
NECEvent2014_8_7_scaffold_5888 178_007_scaffold_5888
Species: Clostridium sp. IBUN125C (100%)
2 1132 bp 27.65 7.42 71.02
NECEvent2014_8_7_scaffold_2122 178_007_scaffold_2122
Species: Clostridium butyricum (50%)
2 2760 bp 26.99 8.48 71.30
NECEvent2014_8_7_scaffold_3199 178_007_scaffold_3199
Species: Clostridium butyricum (100%)
1 1906 bp 29.49 9.13 71.46
NECEvent2014_8_7_scaffold_1011 178_007_scaffold_1011
Species: Clostridium sp. IBUN125C (80%)
5 5397 bp 28.89 12.78 71.48
NECEvent2014_8_7_scaffold_3635 178_007_scaffold_3635
Species: Clostridium sp. IBUN125C (66.67%)
3 1704 bp 28.11 9.15 71.65
NECEvent2014_8_7_scaffold_2175 178_007_scaffold_2175
Genus: Clostridium (100%)
3 2695 bp 29.68 12.47 71.80
NECEvent2014_8_7_scaffold_4654 178_007_scaffold_4654
Species: Clostridium butyricum (100%)
1 1383 bp 23.36 11.50 71.80
NECEvent2014_8_7_scaffold_1603 178_007_scaffold_1603
Species: Clostridium sp. IBUN125C (50%)
4 3585 bp 29.79 13.72 71.88
NECEvent2014_8_7_scaffold_1384 178_007_scaffold_1384
Species: Clostridium sp. IBUN125C (60%)
5 4123 bp 28.74 9.42 72.03
NECEvent2014_8_7_scaffold_5357 178_007_scaffold_5357
Species: Clostridium sp. IBUN125C (100%)
1 1227 bp 24.61 6.85 72.13
NECEvent2014_8_7_scaffold_1549 178_007_scaffold_1549
Species: Clostridium butyricum (50%)
4 3733 bp 28.13 9.52 72.33
NECEvent2014_8_7_scaffold_4296 178_007_scaffold_4296
Species: Clostridium butyricum (50%)
4 1479 bp 26.77 7.91 72.41
NECEvent2014_8_7_scaffold_4760 178_007_scaffold_4760
Species: Clostridium sp. IBUN125C (100%)
1 1361 bp 29.39 11.57 72.52
NECEvent2014_8_7_scaffold_4114 178_007_scaffold_4114
Species: Clostridium butyricum (100%)
1 1528 bp 29.97 11.58 72.64
NECEvent2014_8_7_scaffold_1195 178_007_scaffold_1195
Species: Clostridium sp. IBUN13A (85.71%)
7 4691 bp 28.93 11.32 72.65
NECEvent2014_8_7_scaffold_5392 178_007_scaffold_5392
Species: Clostridium butyricum (100%)
1 1218 bp 28.08 9.85 72.66
NECEvent2014_8_7_scaffold_5204 178_007_scaffold_5204
Species: Clostridium sp. IBUN125C (100%)
1 1260 bp 27.78 10.00 72.86
NECEvent2014_8_7_scaffold_2840 178_007_scaffold_2840
Species: Clostridium butyricum (50%)
2 2103 bp 28.29 10.70 73.04
NECEvent2014_8_7_scaffold_2243 178_007_scaffold_2243
Species: Clostridium butyricum (50%)
2 2602 bp 27.25 10.49 73.33
NECEvent2014_8_7_scaffold_3495 178_007_scaffold_3495
Species: Clostridium butyricum (100%)
1 1762 bp 30.31 13.20 73.38
NECEvent2014_8_7_scaffold_2506 178_007_scaffold_2506
Species: Clostridium butyricum (75%)
4 2342 bp 25.83 7.30 73.40
NECEvent2014_8_7_scaffold_6813 178_007_scaffold_6813
Species: Clostridium butyricum (100%)
3 1004 bp 28.49 6.27 73.80
NECEvent2014_8_7_scaffold_1967 178_007_scaffold_1967
Species: Clostridium butyricum (100%)
3 2975 bp 27.50 9.53 74.12
NECEvent2014_8_7_scaffold_6765 178_007_scaffold_6765
Species: Clostridium butyricum (100%)
1 1011 bp 27.79 6.23 74.18
NECEvent2014_8_7_scaffold_2324 178_007_scaffold_2324
Genus: Clostridium (80%)
5 2511 bp 29.55 9.20 74.19
NECEvent2014_8_7_scaffold_5018 178_007_scaffold_5018
Species: Clostridium sp. IBUN13A (100%)
1 1299 bp 30.56 15.94 74.36
NECEvent2014_8_7_scaffold_2501 178_007_scaffold_2501
Species: Clostridium butyricum (50%)
2 2343 bp 27.44 13.51 74.39
NECEvent2014_8_7_scaffold_1666 178_007_scaffold_1666
Genus: Clostridium (100%)
3 3446 bp 30.62 15.80 74.52
NECEvent2014_8_7_scaffold_3966 178_007_scaffold_3966
Species: Clostridium butyricum (100%)
1 1574 bp 26.75 8.48 74.52
NECEvent2014_8_7_scaffold_4988 178_007_scaffold_4988
Species: Clostridium butyricum (100%)
1 1307 bp 29.84 11.36 74.60
NECEvent2014_8_7_scaffold_3278 178_007_scaffold_3278
Species: Clostridium sp. IBUN125C (100%)
2 1864 bp 27.36 7.16 74.68
NECEvent2014_8_7_scaffold_1957 178_007_scaffold_1957
Species: Clostridium butyricum (60%)
5 2996 bp 29.17 10.56 74.70
NECEvent2014_8_7_scaffold_6845 178_007_scaffold_6845
Species: Clostridium butyricum (100%)
1 1000 bp 32.10 26.55 74.70
NECEvent2014_8_7_scaffold_6650 178_007_scaffold_6650
Species: Clostridium butyricum (100%)
1 1027 bp 27.56 15.48 74.78
NECEvent2014_8_7_scaffold_3384 178_007_scaffold_3384
Species: Clostridium sp. IBUN125C (50%)
2 1805 bp 32.35 14.29 74.79
NECEvent2014_8_7_scaffold_3187 178_007_scaffold_3187
Species: Clostridium butyricum (100%)
1 1915 bp 24.54 6.58 74.88
NECEvent2014_8_7_scaffold_3902 178_007_scaffold_3902
Species: Clostridium sp. IBUN13A (50%)
2 1598 bp 28.35 12.02 74.91
NECEvent2014_8_7_scaffold_5211 178_007_scaffold_5211
Species: Clostridium butyricum (100%)
1 1257 bp 30.31 14.32 74.94
NECEvent2014_8_7_scaffold_3640 178_007_scaffold_3640
Species: Clostridium butyricum (50%)
2 1702 bp 28.03 7.40 74.97
NECEvent2014_8_7_scaffold_3672 178_007_scaffold_3672
Species: Clostridium sp. IBUN125C (100%)
1 1692 bp 29.43 8.60 75.18
NECEvent2014_8_7_scaffold_4105 178_007_scaffold_4105
Species: Clostridium butyricum (50%)
4 1530 bp 25.82 8.04 75.29
NECEvent2014_8_7_scaffold_6690 178_007_scaffold_6690
Species: Leuconostoc sp. DORA_2 (100%)
1 1020 bp 27.16 5.88 75.29
NECEvent2014_8_7_scaffold_3144 178_007_scaffold_3144
Species: Clostridium sp. IBUN125C (100%)
1 1934 bp 26.32 10.24 75.39
NECEvent2014_8_7_scaffold_2112 178_007_scaffold_2112
Genus: Clostridium (100%)
3 2777 bp 25.10 7.67 75.41
NECEvent2014_8_7_scaffold_4175 178_007_scaffold_4175
Species: Clostridium sp. IBUN22A (100%)
1 1514 bp 31.77 16.25 75.50
Displaying items 51-100 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.