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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_2783 178_007_scaffold_2783
Species: Clostridium butyricum (100%)
2 2136 bp 31.84 15.31 75.56
NECEvent2014_8_7_scaffold_2731 178_007_scaffold_2731
Species: Clostridium butyricum (100%)
1 2166 bp 27.61 9.90 75.62
NECEvent2014_8_7_scaffold_5792 178_007_scaffold_5792
Species: Clostridium butyricum (100%)
1 1146 bp 28.36 11.78 75.65
NECEvent2014_8_7_scaffold_6191 178_007_scaffold_6191
Species: Clostridium butyricum (100%)
1 1089 bp 26.45 4.96 75.76
NECEvent2014_8_7_scaffold_2991 178_007_scaffold_2991
Species: Clostridium butyricum (100%)
2 2007 bp 29.60 14.05 76.23
NECEvent2014_8_7_scaffold_2844 178_007_scaffold_2844
Species: Clostridium sp. IBUN125C (100%)
2 2101 bp 29.56 10.71 76.25
NECEvent2014_8_7_scaffold_5753 178_007_scaffold_5753
Species: Clostridium butyricum (100%)
1 1152 bp 29.69 16.93 76.30
NECEvent2014_8_7_scaffold_4974 178_007_scaffold_4974
Species: Clostridium butyricum (100%)
1 1312 bp 22.48 3.20 76.37
NECEvent2014_8_7_scaffold_6096 178_007_scaffold_6096
Species: Clostridium sp. IBUN22A (100%)
1 1101 bp 24.25 4.36 76.57
NECEvent2014_8_7_scaffold_2064 178_007_scaffold_2064
Species: Clostridium butyricum (66.67%)
6 2835 bp 28.96 8.94 76.61
NECEvent2014_8_7_scaffold_5237 178_007_scaffold_5237
Species: Clostridium butyricum (100%)
1 1252 bp 25.80 7.91 76.68
NECEvent2014_8_7_scaffold_5293 178_007_scaffold_5293
Species: Clostridium butyricum (50%)
2 1240 bp 25.56 5.32 76.94
NECEvent2014_8_7_scaffold_2317 178_007_scaffold_2317
Genus: Clostridium (100%)
3 2521 bp 30.50 15.65 76.99
NECEvent2014_8_7_scaffold_2362 178_007_scaffold_2362
Species: Clostridium butyricum (60%)
5 2470 bp 30.85 13.48 77.13
NECEvent2014_8_7_scaffold_2770 178_007_scaffold_2770
Genus: Clostridium (100%)
3 2143 bp 28.56 8.68 77.13
NECEvent2014_8_7_scaffold_4104 178_007_scaffold_4104
Species: Clostridium sp. IBUN13A (100%)
1 1531 bp 30.05 9.80 77.20
NECEvent2014_8_7_scaffold_2332 178_007_scaffold_2332
Species: Clostridium butyricum (50%)
4 2501 bp 27.83 6.48 77.25
NECEvent2014_8_7_scaffold_3668 178_007_scaffold_3668
Species: Clostridium sp. IBUN13A (66.67%)
3 1693 bp 28.94 8.33 77.26
NECEvent2014_8_7_scaffold_1837 178_007_scaffold_1837
Species: Clostridium butyricum (50%)
4 3145 bp 29.22 10.40 77.27
NECEvent2014_8_7_scaffold_3699 178_007_scaffold_3699
Species: Clostridium butyricum (66.67%)
3 1680 bp 31.79 11.43 77.32
NECEvent2014_8_7_scaffold_4192 178_007_scaffold_4192
Species: Clostridium butyricum (50%)
2 1509 bp 29.56 5.17 77.34
NECEvent2014_8_7_scaffold_2186 178_007_scaffold_2186
Species: Clostridium sp. IBUN125C (50%)
6 2686 bp 28.93 14.69 77.40
NECEvent2014_8_7_scaffold_3952 178_007_scaffold_3952
Species: Clostridium butyricum (50%)
2 1579 bp 24.83 4.94 77.52
NECEvent2014_8_7_scaffold_1557 178_007_scaffold_1557
Species: Clostridium sp. IBUN13A (50%)
4 3718 bp 29.96 12.99 77.54
NECEvent2014_8_7_scaffold_3070 178_007_scaffold_3070
Species: Clostridium butyricum (50%)
4 1977 bp 26.76 6.98 77.54
NECEvent2014_8_7_scaffold_2414 178_007_scaffold_2414
Species: Clostridium butyricum (100%)
2 2417 bp 29.42 8.07 77.58
NECEvent2014_8_7_scaffold_3510 178_007_scaffold_3510
Species: Clostridium sp. IBUN125C (100%)
1 1751 bp 30.27 20.39 77.61
NECEvent2014_8_7_scaffold_4139 178_007_scaffold_4139
Species: Clostridium butyricum (66.67%)
3 1522 bp 26.08 7.79 77.66
NECEvent2014_8_7_scaffold_3420 178_007_scaffold_3420
Species: Clostridium sp. IBUN13A (66.67%)
3 1792 bp 28.35 9.04 77.68
NECEvent2014_8_7_scaffold_6814 178_007_scaffold_6814
Species: Clostridium butyricum (50%)
2 1004 bp 27.99 5.68 77.69
NECEvent2014_8_7_scaffold_1442 178_007_scaffold_1442
Species: Clostridium sp. IBUN125C (50%)
4 3949 bp 33.12 21.42 77.79
NECEvent2014_8_7_scaffold_5422 178_007_scaffold_5422
Species: Clostridium butyricum (100%)
1 1213 bp 25.39 4.70 77.91
NECEvent2014_8_7_scaffold_3929 178_007_scaffold_3929
Species: Clostridium sp. IBUN125C (50%)
2 1586 bp 26.54 7.94 77.93
NECEvent2014_8_7_scaffold_2811 178_007_scaffold_2811
Species: Clostridium butyricum (100%)
2 2121 bp 29.56 10.04 77.93
NECEvent2014_8_7_scaffold_3031 178_007_scaffold_3031
Species: Clostridium butyricum (100%)
3 1990 bp 27.39 5.80 77.94
NECEvent2014_8_7_scaffold_2212 178_007_scaffold_2212
Species: Clostridium butyricum (66.67%)
3 2643 bp 37.23 28.09 77.98
NECEvent2014_8_7_scaffold_2739 178_007_scaffold_2739
Genus: Clostridium (66.67%)
3 2158 bp 30.26 11.33 77.99
NECEvent2014_8_7_scaffold_4823 178_007_scaffold_4823
Species: Clostridium sp. IBUN125C (100%)
1 1346 bp 30.68 20.39 78.01
NECEvent2014_8_7_scaffold_6673 178_007_scaffold_6673
Species: Clostridium butyricum (100%)
2 1022 bp 26.03 5.72 78.08
NECEvent2014_8_7_scaffold_2807 178_007_scaffold_2807
Species: Clostridium sp. IBUN13A (50%)
2 2124 bp 30.60 12.29 78.11
NECEvent2014_8_7_scaffold_1586 178_007_scaffold_1586
Genus: Clostridium (66.67%)
3 3636 bp 30.72 16.87 78.14
NECEvent2014_8_7_scaffold_5066 178_007_scaffold_5066
Species: Clostridium sp. IBUN125C (100%)
2 1289 bp 25.37 5.35 78.20
NECEvent2014_8_7_scaffold_6158 178_007_scaffold_6158
Species: Clostridium butyricum (100%)
1 1093 bp 31.75 12.63 78.23
NECEvent2014_8_7_scaffold_5487 178_007_scaffold_5487
Species: Clostridium sp. IBUN125C (50%)
2 1200 bp 29.50 10.75 78.25
NECEvent2014_8_7_scaffold_1749 178_007_scaffold_1749
Species: Clostridium sp. IBUN125C (66.67%)
3 3297 bp 30.21 12.74 78.34
NECEvent2014_8_7_scaffold_4612 178_007_scaffold_4612
Species: Clostridium butyricum (100%)
1 1394 bp 29.91 11.62 78.55
NECEvent2014_8_7_scaffold_2492 178_007_scaffold_2492
Species: Clostridium sp. IBUN125C (100%)
2 2348 bp 28.62 9.52 78.58
NECEvent2014_8_7_scaffold_5742 178_007_scaffold_5742
Species: Clostridium butyricum (100%)
2 1153 bp 26.80 7.81 78.58
NECEvent2014_8_7_scaffold_6587 178_007_scaffold_6587
Species: Clostridium butyricum (100%)
2 1034 bp 27.66 6.67 78.63
NECEvent2014_8_7_scaffold_6211 178_007_scaffold_6211
Species: Clostridium butyricum (100%)
1 1086 bp 31.31 11.60 78.73
Displaying items 101-150 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.