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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_1941 178_007_scaffold_1941
Species: Clostridium sp. IBUN125C (50%)
2 3021 bp 31.94 23.04 78.75
NECEvent2014_8_7_scaffold_6721 178_007_scaffold_6721
Species: Clostridium sp. IBUN125C (66.67%)
3 1016 bp 29.82 7.68 78.84
NECEvent2014_8_7_scaffold_2471 178_007_scaffold_2471
Species: Clostridium butyricum (100%)
2 2362 bp 31.71 13.21 78.87
NECEvent2014_8_7_scaffold_3339 178_007_scaffold_3339
Species: Clostridium sp. IBUN125C (100%)
2 1833 bp 30.55 12.03 78.89
NECEvent2014_8_7_scaffold_2529 178_007_scaffold_2529
Species: Clostridium butyricum (66.67%)
3 2323 bp 29.75 16.21 78.91
NECEvent2014_8_7_scaffold_6087 178_007_scaffold_6087
Species: Clostridium butyricum (100%)
2 1102 bp 26.13 5.72 78.95
NECEvent2014_8_7_scaffold_2984 178_007_scaffold_2984
Species: Clostridium sp. IBUN125C (50%)
2 2009 bp 29.12 11.35 78.99
NECEvent2014_8_7_scaffold_6363 178_007_scaffold_6363
Species: Clostridium sp. IBUN125C (100%)
1 1063 bp 29.54 11.29 79.02
NECEvent2014_8_7_scaffold_3541 178_007_scaffold_3541
Species: Clostridium sp. IBUN125C (100%)
2 1740 bp 28.51 10.52 79.14
NECEvent2014_8_7_scaffold_3121 178_007_scaffold_3121
Species: Clostridium butyricum (100%)
2 1947 bp 30.41 13.25 79.20
NECEvent2014_8_7_scaffold_4107 178_007_scaffold_4107
Species: Clostridium sp. IBUN125C (100%)
1 1530 bp 31.50 13.14 79.22
NECEvent2014_8_7_scaffold_6631 178_007_scaffold_6631
Species: Clostridium butyricum (50%)
2 1030 bp 28.74 15.44 79.22
NECEvent2014_8_7_scaffold_5061 178_007_scaffold_5061
Species: Clostridium butyricum (100%)
1 1289 bp 29.09 10.71 79.36
NECEvent2014_8_7_scaffold_4460 178_007_scaffold_4460
Species: Clostridium sp. IBUN125C (50%)
2 1432 bp 27.16 6.91 79.40
NECEvent2014_8_7_scaffold_3159 178_007_scaffold_3159
Species: human gut metagenome (50%)
2 1930 bp 29.64 11.97 79.43
NECEvent2014_8_7_scaffold_5356 178_007_scaffold_5356
Species: Clostridium sp. IBUN125C (100%)
2 1227 bp 24.61 6.36 79.46
NECEvent2014_8_7_scaffold_2081 178_007_scaffold_2081
Species: Clostridium butyricum (100%)
1 2812 bp 29.73 13.44 79.59
NECEvent2014_8_7_scaffold_3004 178_007_scaffold_3004
Species: Clostridium butyricum (100%)
2 2003 bp 31.90 16.55 79.68
NECEvent2014_8_7_scaffold_1408 178_007_scaffold_1408
Species: Clostridium butyricum (100%)
5 4063 bp 31.11 16.47 79.74
NECEvent2014_8_7_scaffold_5992 178_007_scaffold_5992
Species: Clostridium sp. IBUN125C (50%)
2 1117 bp 25.87 6.71 79.77
NECEvent2014_8_7_scaffold_3101 178_007_scaffold_3101
Species: Clostridium sp. IBUN125C (50%)
2 1959 bp 29.66 14.70 79.79
NECEvent2014_8_7_scaffold_5400 178_007_scaffold_5400
Species: Clostridium butyricum (100%)
1 1217 bp 29.75 4.93 79.87
NECEvent2014_8_7_scaffold_2162 178_007_scaffold_2162
Species: Clostridium sp. IBUN125C (50%)
2 2717 bp 27.13 7.45 79.94
NECEvent2014_8_7_scaffold_4821 178_007_scaffold_4821
Species: Clostridium sp. IBUN125C (100%)
3 1347 bp 27.32 7.46 79.96
NECEvent2014_8_7_scaffold_3926 178_007_scaffold_3926
Genus: Clostridium (100%)
3 1587 bp 27.85 6.62 79.96
NECEvent2014_8_7_scaffold_3214 178_007_scaffold_3214
Species: Clostridium sp. IBUN125C (50%)
2 1896 bp 30.70 15.74 80.06
NECEvent2014_8_7_scaffold_3368 178_007_scaffold_3368
Species: Clostridium butyricum (50%)
4 1817 bp 27.46 9.74 80.08
NECEvent2014_8_7_scaffold_2158 178_007_scaffold_2158
Genus: Clostridium (80%)
5 2723 bp 28.20 6.61 80.10
NECEvent2014_8_7_scaffold_1161 178_007_scaffold_1161
Genus: Clostridium (66.67%)
6 4795 bp 30.22 12.26 80.10
NECEvent2014_8_7_scaffold_4206 178_007_scaffold_4206
Species: Clostridium sp. IBUN125C (100%)
2 1505 bp 28.64 9.27 80.13
NECEvent2014_8_7_scaffold_6529 178_007_scaffold_6529
Species: Clostridium butyricum (50%)
2 1043 bp 28.09 7.48 80.25
NECEvent2014_8_7_scaffold_1004 178_007_scaffold_1004
Species: Clostridium butyricum (66.67%)
3 5423 bp 29.23 11.64 80.38
NECEvent2014_8_7_scaffold_3306 178_007_scaffold_3306
Species: Clostridium butyricum (100%)
1 1851 bp 25.61 7.46 80.39
NECEvent2014_8_7_scaffold_2609 178_007_scaffold_2609
Species: Clostridium sp. IBUN13A (50%)
4 2253 bp 27.83 5.86 80.43
NECEvent2014_8_7_scaffold_1686 178_007_scaffold_1686
Species: Clostridium butyricum (66.67%)
3 3420 bp 26.23 8.64 80.44
NECEvent2014_8_7_scaffold_2814 178_007_scaffold_2814
Species: Clostridium butyricum (66.67%)
3 2121 bp 27.16 8.91 80.48
NECEvent2014_8_7_scaffold_3455 178_007_scaffold_3455
Species: Clostridium sp. IBUN22A (100%)
1 1778 bp 31.10 11.14 80.48
NECEvent2014_8_7_scaffold_5535 178_007_scaffold_5535
Species: Clostridium butyricum (100%)
2 1191 bp 30.23 16.37 80.60
NECEvent2014_8_7_scaffold_3265 178_007_scaffold_3265
Species: Clostridium sp. IBUN13A (100%)
2 1872 bp 29.75 8.57 80.61
NECEvent2014_8_7_scaffold_3016 178_007_scaffold_3016
Species: Clostridium butyricum (100%)
2 1998 bp 30.08 6.61 80.63
NECEvent2014_8_7_scaffold_4428 178_007_scaffold_4428
Genus: Clostridium (100%)
3 1443 bp 26.47 5.61 80.67
NECEvent2014_8_7_scaffold_6460 178_007_scaffold_6460
Species: Clostridium sp. IBUN13A (100%)
1 1052 bp 28.04 9.13 80.70
NECEvent2014_8_7_scaffold_1457 178_007_scaffold_1457
Species: Clostridium sp. IBUN125C (50%)
6 3903 bp 26.98 10.15 80.71
NECEvent2014_8_7_scaffold_2466 178_007_scaffold_2466
Species: Clostridium sp. IBUN125C (50%)
2 2367 bp 29.83 16.92 80.74
NECEvent2014_8_7_scaffold_1262 178_007_scaffold_1262
Species: Clostridium sp. IBUN125C (50%)
2 4449 bp 28.95 9.84 80.85
NECEvent2014_8_7_scaffold_5178 178_007_scaffold_5178
Species: Clostridium sp. IBUN125C (50%)
2 1265 bp 30.04 14.23 80.87
NECEvent2014_8_7_scaffold_4896 178_007_scaffold_4896
Species: Clostridium butyricum (100%)
1 1331 bp 27.35 8.79 80.92
NECEvent2014_8_7_scaffold_2202 178_007_scaffold_2202
Genus: Clostridium (100%)
3 2655 bp 27.68 12.82 81.02
NECEvent2014_8_7_scaffold_1804 178_007_scaffold_1804
Species: Clostridium sp. IBUN13A (50%)
2 3196 bp 31.13 10.14 81.10
NECEvent2014_8_7_scaffold_3591 178_007_scaffold_3591
Species: Clostridium butyricum (100%)
2 1723 bp 30.64 8.88 81.14
Displaying items 151-200 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.