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Infant_1_CR_22

Alias: scaffold_82

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Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_CR_22_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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285..779
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="
Dihydrofolate reductase n=31 Tax=root RepID=E4IV16_ENTFC
dfrD_2; dihydrofolate reductase, DfrD_2 (EC:1.5.1.3)
Infant_1_CR_22_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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770..1258
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:EEA82414.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
Uncharacterized protein n=4 Tax=Bacteria RepID=B0P4Y1_9CLOT
Infant_1_CR_22_3
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1285..1605
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:EOK43545.1}; TaxID=1169252 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0335.;
Regulator of competence-specific genes
Regulator of competence-specific genes n=6 Tax=Bacteria RepID=D7GPZ1_9FIRM
Infant_1_CR_22_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1898..2647
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ33269.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0U8_9FIRM
hypothetical protein
Infant_1_CR_22_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2649..3104
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ33270.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N0U9_9FIRM
hypothetical protein
Infant_1_CR_22_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3101..4237
DNA (1137bp) protein (379aa)
UPF0348 protein CLORAM_00077 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source=
UPF0348 protein CLORAM_00077 n=4 Tax=Erysipelotrichaceae RepID=B0N0V0_9FIRM
hypothetical protein
Infant_1_CR_22_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4304..5872)
DNA (1569bp) protein (523aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM92640.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Predicted protein n=4 Tax=Erysipelotrichaceae RepID=C3RN49_9FIRM
MutS domain-containing protein
Infant_1_CR_22_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5869..6474)
DNA (606bp) protein (202aa)
Transcriptional regulator, MerR family n=4 Tax=Erysipelotrichaceae RepID=B0N0V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33275.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
mta; HTH-type transcriptional activator mta
Infant_1_CR_22_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6621..8240
DNA (1620bp) protein (540aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ45183.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Glycosyl hydrolase family 2, sugar binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N0V3_9FIRM
glycoside hydrolase 2 sugar binding protein
Infant_1_CR_22_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8249..8506)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS19990.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipel
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0V4_9FIRM
copper chaperone
Infant_1_CR_22_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8626..11016)
DNA (2391bp) protein (797aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=4 Tax=Erysipelotrichaceae RepID=C3RN45_9FIRM
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Infant_1_CR_22_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(11021..12058)
DNA (1038bp) protein (346aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=5 Tax=Erysipelotrichaceae RepID=B1C2A7_9FIRM
pheS; Phenylalanine-tRNA ligase alpha subunit (EC:6.1.1.20)
Infant_1_CR_22_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12425..13192)
DNA (768bp) protein (256aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ33280.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0V7_9FIRM
Infant_1_CR_22_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13435..14151)
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ33281.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
tRNA/rRNA methyltransferase n=4 Tax=Erysipelotrichaceae RepID=C3RN42_9FIRM
tRNA/rRNA methyltransferase SpoU
Infant_1_CR_22_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14148..14813)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ45189.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0V9_9FIRM
zinc metalloprotease
Infant_1_CR_22_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14874..15074
DNA (201bp) protein (67aa)
Small acid-soluble spore protein I {ECO:0000313|EMBL:CCZ35105.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental s
Small, acid-soluble spore protein I n=4 Tax=Erysipelotrichaceae RepID=B0N0W0_9FIRM
Infant_1_CR_22_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15079..15522)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35106.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0W1_9FIRM
Infant_1_CR_22_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15515..16360)
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:EHQ45192.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Predicted protein n=4 Tax=Erysipelotrichaceae RepID=C3RN38_9FIRM
Infant_1_CR_22_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16626..18062)
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; C
Pyruvate kinase n=5 Tax=Erysipelotrichaceae RepID=B0N0W3_9FIRM
pyruvate kinase
Infant_1_CR_22_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18098..19081)
DNA (984bp) protein (328aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase n=5 Tax=Erysipelotrichaceae RepID=B0N0W4_9FIRM
6-phosphofructokinase (EC:2.7.1.11)
Infant_1_CR_22_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19165..20073)
DNA (909bp) protein (303aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35110.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Primosomal protein dnaI n=4 Tax=Erysipelotrichaceae RepID=C3RN35_9FIRM
primosomal protein DnaI
Infant_1_CR_22_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20083..21327)
DNA (1245bp) protein (415aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35111.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Replication initiation protein n=4 Tax=Erysipelotrichaceae RepID=C3RN34_9FIRM
dnaB; Replicative DNA helicase loader DnaB
Infant_1_CR_22_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21329..21898)
DNA (570bp) protein (190aa)
Dephospho-CoA kinase n=3 Tax=Coprobacillus RepID=C3RN33_9FIRM
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262853 species="Bacteria; F
dephospho-CoA kinase
Infant_1_CR_22_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21899..22846)
DNA (948bp) protein (316aa)
Dihydrodiol dehydrogenase {ECO:0000313|EMBL:CCZ35132.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;"
Dihydrodiol dehydrogenase n=4 Tax=Erysipelotrichaceae RepID=C3RN32_9FIRM
dehydrogenase or related protein
Infant_1_CR_22_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22848..23660)
DNA (813bp) protein (271aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054
DNA-formamidopyrimidine glycosylase n=4 Tax=Erysipelotrichaceae RepID=B0N0X0_9FIRM
fpg; formamidopyrimidine-DNA glycosylase Fpg (EC:3.2.2.23)
Infant_1_CR_22_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23670..26282)
DNA (2613bp) protein (871aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Copr
DNA polymerase n=4 Tax=Erysipelotrichaceae RepID=B0N0X1_9FIRM
polA; DNA polymerase I (EC:2.7.7.7)
Infant_1_CR_22_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26294..29347)
DNA (3054bp) protein (1018aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotri
DNA polymerase III, alpha subunit n=4 Tax=Erysipelotrichaceae RepID=G9QZH1_9FIRM
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
Infant_1_CR_22_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29787..30032)
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM92619.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0X4_9FIRM
hypothetical protein
Infant_1_CR_22_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30094..31401)
DNA (1308bp) protein (436aa)
Putative 23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDS20011.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatocl
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Erysipelotrichaceae RepID=G9QZG9_9FIRM
yfjO; RNA methyltransferase (EC:2.1.1.-)
Infant_1_CR_22_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31434..32762)
DNA (1329bp) protein (443aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ35152.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
Putative uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GF78_9FIRM
hypothetical protein
Displaying items 1-30 of 59 in total

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