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PLM1_30_b1_sep16_scaffold_271_16

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(17824..18741)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 295.0
  • Bit_score: 288
  • Evalue 7.60e-75
Pseudouridine synthase Tax=Firmicutes bacterium CAG:176 RepID=R6DAN2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 295.0
  • Bit_score: 288
  • Evalue 5.40e-75
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 302.0
  • Bit_score: 275
  • Evalue 1.40e-71

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Taxonomy

Firmicutes bacterium CAG:176 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 918
TTGACCCGGCCGCCCGACCCGGACCAGGTCGCCGGGCGGCGCCTCGACGAGGTGGTCGCGGAGCTGGCCGGGACCTCACGGGCCCAGGCGGCCCGCTGGGCCAGCGACGGCCTGGTCACCGTCGACGGCCGGCCCCGTCCCAAGTCCTACCGGCTCCGGGGGGGCGAGGGGCTCGCCTGGACGCCGCCGCCGGCTCCGCCCTCGGGCGGGCCGGTGGCCGAGGACCGTCCGCTGACCGTCCGCTACGAGGACGACCGGCTGCTGGTGGTGGCCAAGCCGGCCGGCCTGGTCGTGCACCCTGGACCCGGCCACCCCACCGGTACCCTGGTCAACGCCCTCCTGGGACGGCCGGGGACCAGCCTGTCGGCCGGCGGGGGCGCGGCCGACCGCCCCGGCATCGTCCACCGGCTCGACAAGGACACCTCGGGGCTGCTGCTGGTGGCCAAGGACGACGCCACCCACCTGGCCCTGGCCCGCGACCTGGCCGACCACCGGGTCGAGCGCCAGTACCTGGCCCTGGTCCAGGGCCGCCTCCCGGCCTCCTCGGGCACGGTCGACGCCCCCGTCGGCCGCCACCCCCGGGACCGCAAGCGCATGGCCGTCGTCCCCACCGGCCGCCACGCCGTCACCCACTGGCGGGTGCTGGAGACCTTCCCGGCCGTCCAGCTGGCCGAGGCCACCCTTGAGACCGGCCGCACCCACCAGGTCCGGGTCCACCTGGCCTCGCTGCGCCACCCCCTGGCCGGCGACCGCACCTACGGCGCCGACCCCACCCTGGCGGCCAGGCTCGGCCTGGCCCGCCCCTTCCTCCACGCCTGGCGCCTGGCCTTCGACCACCCCGGCGACGGCACCCGGGTCGAGCTCACCGAGCCCCTCCCCCCCGAGCTCCAGTCGGTCCTCGACCGCCTCCGCGGCTAG
PROTEIN sequence
Length: 306
LTRPPDPDQVAGRRLDEVVAELAGTSRAQAARWASDGLVTVDGRPRPKSYRLRGGEGLAWTPPPAPPSGGPVAEDRPLTVRYEDDRLLVVAKPAGLVVHPGPGHPTGTLVNALLGRPGTSLSAGGGAADRPGIVHRLDKDTSGLLLVAKDDATHLALARDLADHRVERQYLALVQGRLPASSGTVDAPVGRHPRDRKRMAVVPTGRHAVTHWRVLETFPAVQLAEATLETGRTHQVRVHLASLRHPLAGDRTYGADPTLAARLGLARPFLHAWRLAFDHPGDGTRVELTEPLPPELQSVLDRLRG*