ggKbase home page

PLM1_30_b1_sep16_scaffold_271_17

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(18738..19259)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 147
  • Evalue 9.10e-33
lspA; lipoprotein signal peptidase (EC:3.4.23.36) similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 155.0
  • Bit_score: 145
  • Evalue 1.20e-32
Lipoprotein signal peptidase Tax=Frankia sp. QA3 RepID=I9KGD8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 147
  • Evalue 6.50e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGGCCGAGCCGGGCGCGACGGGGCGGTCCAGGCGGGCCCTGGCCCTGTACGGGACCGCCGCCGTCGTGCTCGCCCTCGACCAGCTCACCAAGCACCTGGTGGTCAGCAACCTGGCCGGGCGCCCGCCGGTCGACCTGGTCGACGACGTCGTCCAGCTCCGCTACACCACCAACTCCGGCGGGGCGTTCTCGCTGCTGACCGGGGCGCCGTTGTTCTTCGGGATCATGGCCTTGGTGATCATCGGCGGGATCGTCTACGCCTCCCGCCGGGCCCAGCCCCTGTCCATGCTGGTGATCCTCGGCCTGATCCTCGGCGGGGCCCTCGGGAACCTGACCGACCGCCTGCTGCGGGGCGACGCGCTGCTCCGGGGCGAGGTGGTCGACTTCATCAAGGTCGGCATCTGGCCGGTGTTCAACCTGGCCGACTCCTGCGTGGTCGTCGGCGGGATCCTCCTGGCGCTCTTCCTCGGCAAGGCCGAGCGGGAGAGCGAGCAGGCCCCGGCCGACACCGACCGGGCTTGA
PROTEIN sequence
Length: 174
MAEPGATGRSRRALALYGTAAVVLALDQLTKHLVVSNLAGRPPVDLVDDVVQLRYTTNSGGAFSLLTGAPLFFGIMALVIIGGIVYASRRAQPLSMLVILGLILGGALGNLTDRLLRGDALLRGEVVDFIKVGIWPVFNLADSCVVVGGILLALFLGKAERESEQAPADTDRA*