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PLM1_60_b1_redo_sep16_scaffold_15

Search features with annotation key words

Displaying items 31-60 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_15_31
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

26259..26849
DNA (591bp) protein (197aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM1_60_b1_redo_sep16_scaffold_15_32
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

26951..28015
DNA (1065bp) protein (355aa)
cyaI2; guanylate cyclase (EC:4.6.1.1)
hypothetical protein Tax=Rhizobium leguminosarum RepID=UPI0003605798
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_15_33
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28055..29368)
DNA (1314bp) protein (438aa)
hyaluronan synthase (EC:2.4.1.212)
Hyaluronan synthase {ECO:0000313|EMBL:AEH10397.1}; EC=2.4.1.212 {ECO:0000313|EMBL:AEH10397.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Uncharacterized protein Tax=Enterococcus faecium EnGen0007 RepID=L2L2Z7_ENTFC
PLM1_60_b1_redo_sep16_scaffold_15_34
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

29733..32888
DNA (3156bp) protein (1052aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_15_35
unknown

Not on your lists

33085..33384
DNA (300bp) protein (100aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_36
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

comp(33473..34249)
DNA (777bp) protein (259aa)
gdh; glucose 1-dehydrogenase (EC:1.1.1.47)
hypothetical protein Tax=Pandoraea sp. B-6 RepID=UPI0003718F7C
Tax=RBG_13_OP11_40_7b_curated
PLM1_60_b1_redo_sep16_scaffold_15_37
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34619..35311)
DNA (693bp) protein (231aa)
Crp family transcriptional regulator Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XHB1_MICPN
Crp/Fnr family transcriptional regulator
Crp family transcriptional regulator {ECO:0000313|EMBL:BAK38119.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_60_b1_redo_sep16_scaffold_15_38

Not on your lists

35591..37108
DNA (1518bp) protein (506aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BVE4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN68811.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM1_60_b1_redo_sep16_scaffold_15_39
unknown

Not on your lists

comp(37206..37658)
DNA (453bp) protein (151aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_40
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37658..39298)
DNA (1641bp) protein (547aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036F6DA6
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AEW96045.1}; Uncharacterized protein {ECO:0000313|EMBL:CCB76380.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_15_41
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

39556..40833
DNA (1278bp) protein (426aa)
Putative signal transduction histidine kinase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F101_CONWI
signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ADB50077.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_15_42
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40830..41564
DNA (735bp) protein (245aa)
Response regulator receiver Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4XBF6_SALTO
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ABP56255.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_15_43
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41609..42436)
DNA (828bp) protein (276aa)
ABC transporter Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EPJ6_STRRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_15_44
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42433..43191)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EQJ6_STRRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELQ81424.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
putative ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_15_45
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43367..44539)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00036AB022
Uncharacterized protein {ECO:0000313|EMBL:EWT03165.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_46
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44705..45499
DNA (795bp) protein (265aa)
HAD family hydrolase Tax=Nocardia sp. BMG111209 RepID=UPI0003633C47
nagD; Protein nagD
N-acetyl-glucosamine catabolism protein {ECO:0000313|EMBL:AEW94267.1}; Protein nagD {ECO:0000313|EMBL:CCB74624.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_15_47
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

45568..46407
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q566_9BACT
hypothetical protein
Tax=CG_Omnitr_04
PLM1_60_b1_redo_sep16_scaffold_15_48
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46483..46749)
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=Streptomyces sviceus ATCC 29083 RepID=B5I712_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY60867.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_49
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47045..48898
DNA (1854bp) protein (618aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9T8_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73801.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_15_50
unknown

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49203..49466
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_51
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49605..51110)
DNA (1506bp) protein (502aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS85_RUBXD
hypothetical protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_60_b1_redo_sep16_scaffold_15_52
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51111..52475)
DNA (1365bp) protein (455aa)
FAD linked oxidase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS84_RUBXD
FAD linked oxidase-like protein
FAD linked oxidase-like protein {ECO:0000313|EMBL:ABG05744.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_60_b1_redo_sep16_scaffold_15_53
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52477..53934)
DNA (1458bp) protein (486aa)
D-lactate dehydrogenase (EC:1.1.2.4)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:ABG05745.1}; EC=1.1.2.4 {ECO:0000313|EMBL:ABG05745.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
D-lactate dehydrogenase (Cytochrome) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS83_RUBXD
PLM1_60_b1_redo_sep16_scaffold_15_54
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53980..55578)
DNA (1599bp) protein (533aa)
malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Malate synthase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML9_THEM7
PLM1_60_b1_redo_sep16_scaffold_15_55
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(55864..56505)
DNA (642bp) protein (214aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Pyridoxamine 5'-phosphate oxidase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI68_ROSCS
PLM1_60_b1_redo_sep16_scaffold_15_56
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

56658..57629
DNA (972bp) protein (324aa)
ROK family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF08_CONWI
ROK family protein
ROK family protein {ECO:0000313|EMBL:ADB51725.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_15_57
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57758..59158
DNA (1401bp) protein (467aa)
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
metal dependent phosphohydrolase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
PLM1_60_b1_redo_sep16_scaffold_15_58
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(59387..60730)
DNA (1344bp) protein (448aa)
Glucose/sorbosone dehydrogenase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B203_STRRD
glucose/sorbosone dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_15_59
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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60920..61933
DNA (1014bp) protein (338aa)
DnaB domain protein helicase domain protein bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DnaB domain-containing protein helicase domain-containing protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_60_b1_redo_sep16_scaffold_15_60
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62132..62704)
DNA (573bp) protein (191aa)
Transcriptional regulator Tax=Agrococcus pavilionensis RW1 RepID=U1MYD9_9MICO
Transcriptional regulator {ECO:0000313|EMBL:ERG65560.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
putative ethanolamine two-component response regulator
Displaying items 31-60 of 147 in total

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