ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_15

Search features with annotation key words

Displaying items 91-120 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_15_91
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(105154..105855)
DNA (702bp) protein (234aa)
CAAX amino terminal protease family protein bin=GWD2_Chloroflexi_49_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Abortive infection protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM1_60_b1_redo_sep16_scaffold_15_92
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(105936..108107)
DNA (2172bp) protein (724aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase bin=GWD2_Chloroflexi_49_16 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
1,4-dihydroxy-2-naphthoate octaprenyltransferase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM1_60_b1_redo_sep16_scaffold_15_93
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108372..109766)
DNA (1395bp) protein (465aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036BB1E4
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:KIF03067.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
pyridoxal-dependent decarboxylase
PLM1_60_b1_redo_sep16_scaffold_15_94
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110188..111825
DNA (1638bp) protein (546aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZ27_CATAD
delta-1-pyrroline-5-carboxylate dehydrogenase
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACU69583.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_15_95
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111859..113184
DNA (1326bp) protein (442aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003761492
Uncharacterized protein {ECO:0000313|EMBL:CCM61829.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative major facilitator superfamily transporter
PLM1_60_b1_redo_sep16_scaffold_15_96
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113310..113960
DNA (651bp) protein (217aa)
photosystem reaction center subunit H Tax=Arthrobacter sp. M2012083 RepID=UPI0002E97CFA
Uncharacterized protein {ECO:0000313|EMBL:EMQ96670.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_97
unknown

Not on your lists

comp(114203..114589)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_98
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115706..115996)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Vibrio caribbenthicus ATCC BAA-2122 RepID=E3BP68_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:ETW99404.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_99
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116005..117318)
DNA (1314bp) protein (438aa)
Putative hemagglutinin (DUF637) (Fragment) Tax=Pseudomonas sp. GM17 RepID=J3E3P8_9PSED
Putative hemagglutinin (DUF637) {ECO:0000313|EMBL:EJM04477.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_100
unknown

Not on your lists

comp(117319..117657)
DNA (339bp) protein (113aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_101
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117808..121923)
DNA (4116bp) protein (1372aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003626AD7
DNA helicase {ECO:0000313|EMBL:EWT05247.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
DNA helicase
PLM1_60_b1_redo_sep16_scaffold_15_102
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121972..122922)
DNA (951bp) protein (317aa)
Aldo/keto reductase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW28_FRADG
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEH11350.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_15_103
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(123090..125150)
DNA (2061bp) protein (687aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:ACY96921.1}; EC=3.4.21.26 {ECO:0000313|EMBL:ACY96921.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Peptidase S9 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSM9_9ACTO
PLM1_60_b1_redo_sep16_scaffold_15_104
unknown

Not on your lists

125378..126118
DNA (741bp) protein (247aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_105
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(126133..127158)
DNA (1026bp) protein (342aa)
alcohol dehydrogenase Tax=Amycolatopsis balhimycina RepID=UPI000379A3E7
Alcohol dehydrogenase {ECO:0000313|EMBL:EOD63907.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
adh; alcohol dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_15_106
unknown

Not on your lists

comp(127155..128006)
DNA (852bp) protein (284aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_107
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(128003..128524)
DNA (522bp) protein (174aa)
DUF59 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM1_60_b1_redo_sep16_scaffold_15_108
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128521..129630)
DNA (1110bp) protein (370aa)
Putative amidohydrolase Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYB1_ACIMA
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:KDM66336.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
PLM1_60_b1_redo_sep16_scaffold_15_109
unknown

Not on your lists

comp(129952..130761)
DNA (810bp) protein (270aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_110
unknown

Not on your lists

comp(130763..130876)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_111
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131035..131886)
DNA (852bp) protein (284aa)
Alpha/beta hydrolase fold family protein Tax=Mycobacterium hassiacum RepID=K5BKM6_9MYCO
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EKF25129.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_112
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132056..134095)
DNA (2040bp) protein (680aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000378C731
Uncharacterized protein {ECO:0000313|EMBL:EYU69157.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_113
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

134646..137714
DNA (3069bp) protein (1023aa)
DNA/RNA helicase, superfamily II, SNF2 family Tax=Saccharomonospora marina XMU15 RepID=H5X8D4_9PSEU
DNA/RNA helicase, superfamily II, SNF2 family {ECO:0000313|EMBL:EHR50230.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_114
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

137714..139084
DNA (1371bp) protein (457aa)
Molecular chaperone Tax=Saccharomonospora marina XMU15 RepID=H5X8D3_9PSEU
Molecular chaperone {ECO:0000313|EMBL:EHR50229.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
molecular chaperone-like protein
PLM1_60_b1_redo_sep16_scaffold_15_115
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(139664..141424)
DNA (1761bp) protein (587aa)
DUF262 domain-containing protein Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X0G4_STRVR
DUF262 domain-containing protein {ECO:0000313|EMBL:EFL35548.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_15_116
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141430..146472)
DNA (5043bp) protein (1681aa)
Uncharacterized protein Tax=Streptomyces albulus CCRC 11814 RepID=S0HP43_STRA9
Helicase {ECO:0000313|EMBL:EXU91967.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
DEAD/DEAH box helicase domain protein
PLM1_60_b1_redo_sep16_scaffold_15_117
unknown

Not on your lists

comp(146469..147260)
DNA (792bp) protein (264aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_15_118
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147266..151141)
DNA (3876bp) protein (1292aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037E1240
Restriction/modification enzyme {ECO:0000313|EMBL:AJE81745.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
restriction/modification enzyme
PLM1_60_b1_redo_sep16_scaffold_15_119
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(151142..154216)
DNA (3075bp) protein (1025aa)
Uncharacterized protein Tax=Streptomyces albulus CCRC 11814 RepID=S0HC90_STRA9
Helicase {ECO:0000313|EMBL:EXU91969.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
helicase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_15_120
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(154213..156414)
DNA (2202bp) protein (734aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000371DA23
NERD domain-containing protein
Displaying items 91-120 of 147 in total

View Taxonomy