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PLM4_65_b1_sep16_Acidobacteria_68_17

PLM4_65cm_b1_redo_sep2016_Bacteria_68_17
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Bacteria

Displaying items 151-200 of 267 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_48030
Domain: Bacteria (100%)
6 4161 bp 66.19 16.26 87.38
PLM4_65_b1_redo_sep16_scaffold_3420
Domain: Bacteria (81.82%)
22 20711 bp 65.91 16.25 97.48
PLM4_65_b1_redo_sep16_scaffold_1619
Domain: Bacteria (62.96%)
27 25421 bp 68.04 16.23 95.25
PLM4_65_b1_redo_sep16_scaffold_38881
Domain: Bacteria (66.67%)
6 4697 bp 63.68 16.22 71.02
PLM4_65_b1_redo_sep16_scaffold_3140
Phylum: Acidobacteria (58.82%)
17 18660 bp 67.72 16.17 90.93
PLM4_65_b1_redo_sep16_scaffold_3634
Phylum: Acidobacteria (53.85%)
13 16572 bp 69.24 16.16 96.69
PLM4_65_b1_redo_sep16_scaffold_10059
Domain: Bacteria (90.91%)
11 9806 bp 68.23 16.15 95.15
PLM4_65_b1_redo_sep16_scaffold_26541
Domain: Bacteria (80%)
5 5793 bp 64.73 16.11 92.91
PLM4_65_b1_redo_sep16_scaffold_2641
Domain: Bacteria (85%)
20 19498 bp 69.29 16.10 95.80
PLM4_65_b1_redo_sep16_scaffold_56577
Domain: Bacteria (85.71%)
7 4383 bp 66.71 16.08 89.60
PLM4_65_b1_redo_sep16_scaffold_4228
Domain: Bacteria (100%)
13 15317 bp 68.73 16.05 95.74
PLM4_65_b1_redo_sep16_scaffold_47360 3 4195 bp 68.72 15.95 96.54
PLM4_65_b1_redo_sep16_scaffold_1586
Domain: Bacteria (92%)
25 25082 bp 67.96 15.94 93.41
PLM4_65_b1_redo_sep16_scaffold_27249
Domain: Bacteria (75%)
8 5710 bp 67.79 15.92 94.68
PLM4_65_b1_redo_sep16_scaffold_1531
Domain: Bacteria (81.82%)
22 25386 bp 68.52 15.91 93.33
PLM4_65_b1_redo_sep16_scaffold_1828
Phylum: Acidobacteria (53.85%)
26 24118 bp 68.72 15.89 95.13
PLM4_65_b1_redo_sep16_scaffold_323
Domain: Bacteria (79.59%)
49 50870 bp 69.54 15.78 94.34
PLM4_65_b1_redo_sep16_scaffold_45905
Class: Deltaproteobacteria (66.67%)
3 4270 bp 66.07 15.77 98.78
PLM4_65_b1_redo_sep16_scaffold_27988
Phylum: Proteobacteria (50%)
8 6325 bp 68.85 15.75 80.87
PLM4_65_b1_redo_sep16_scaffold_6135
Domain: Bacteria (71.43%)
14 12646 bp 68.24 15.73 90.03
PLM4_65_b1_redo_sep16_scaffold_30664
Domain: Bacteria (66.67%)
3 5354 bp 67.46 15.72 89.04
PLM4_65_b1_redo_sep16_scaffold_189160
Domain: Bacteria (60%)
5 4082 bp 68.10 15.65 85.99
PLM4_65_b1_redo_sep16_scaffold_76978
Domain: Bacteria (66.67%)
3 3159 bp 68.79 15.62 87.84
PLM4_65_b1_redo_sep16_scaffold_76070
Phylum: Acidobacteria (50%)
4 3182 bp 67.22 15.60 97.96
PLM4_65_b1_redo_sep16_scaffold_152141
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated (50%)
2 2893 bp 71.66 15.55 99.86
PLM4_65_b1_redo_sep16_scaffold_1143
Phylum: Acidobacteria (55.17%)
29 29155 bp 67.67 15.50 94.83
PLM4_65_b1_redo_sep16_scaffold_23709
Domain: Bacteria (90%)
10 9740 bp 67.21 15.48 94.84
PLM4_65_b1_redo_sep16_scaffold_77128
Phylum: Acidobacteria (50%)
6 6497 bp 70.42 15.42 92.95
PLM4_65_b1_redo_sep16_scaffold_6347
Domain: Bacteria (64.29%)
14 12410 bp 67.42 15.42 95.12
PLM4_65_b1_redo_sep16_scaffold_83686
Phylum: Acidobacteria (66.67%)
3 3343 bp 64.19 15.35 78.79
PLM4_65_b1_redo_sep16_scaffold_18235
Domain: Bacteria (75%)
8 7125 bp 64.66 15.33 84.66
PLM4_65_b1_redo_sep16_scaffold_56479
Domain: Bacteria (87.5%)
8 5413 bp 68.72 15.32 92.55
PLM4_65_b1_redo_sep16_scaffold_77636
Species: R_Acidobacteria_67_28 (100%)
2 5223 bp 66.03 15.25 97.93
PLM4_65_b1_redo_sep16_scaffold_24074
Domain: Bacteria (80%)
5 6112 bp 69.27 15.22 96.55
PLM4_65_b1_redo_sep16_scaffold_44176
Domain: Bacteria (88.89%)
9 7620 bp 69.29 15.20 92.99
PLM4_65_b1_redo_sep16_scaffold_7594
Domain: Bacteria (63.64%)
11 11322 bp 70.03 15.18 91.94
PLM4_65_b1_redo_sep16_scaffold_14770
Domain: Bacteria (88.89%)
9 9496 bp 68.06 15.18 98.66
PLM4_65_b1_redo_sep16_scaffold_73983 6 3233 bp 67.06 15.17 96.97
PLM4_65_b1_redo_sep16_scaffold_75458
Class: Deltaproteobacteria (50%)
4 3197 bp 70.82 15.15 100.13
PLM4_65_b1_redo_sep16_scaffold_74358
Domain: Bacteria (80%)
5 3223 bp 67.24 15.13 94.94
PLM4_65_b1_redo_sep16_scaffold_83903
Domain: Bacteria (100%)
3 3002 bp 63.72 14.99 90.04
PLM4_65_b1_redo_sep16_scaffold_8890
Domain: Bacteria (90.91%)
11 10455 bp 66.54 14.95 79.05
PLM4_65_b1_redo_sep16_scaffold_27648
Species: uncultured bacterium BAC10-4 (57.14%)
7 5661 bp 67.09 14.94 97.40
PLM4_65_b1_redo_sep16_scaffold_11238
Domain: Bacteria (66.67%)
12 9227 bp 66.46 14.87 94.07
PLM4_65_b1_redo_sep16_scaffold_26321
Phylum: Proteobacteria (60%)
5 5820 bp 67.96 14.82 94.54
PLM4_65_b1_redo_sep16_scaffold_46719
Phylum: Acidobacteria (66.67%)
3 4227 bp 69.32 14.80 93.04
PLM4_65_b1_redo_sep16_scaffold_36622
Phylum: Acidobacteria (80%)
5 4858 bp 67.81 14.79 97.63
PLM4_65_b1_redo_sep16_scaffold_38133
Domain: Bacteria (85.71%)
7 4748 bp 63.54 14.79 73.29
PLM4_65_b1_redo_sep16_scaffold_15060
Domain: Bacteria (66.67%)
9 7904 bp 66.08 14.71 94.47
PLM4_65_b1_redo_sep16_scaffold_93877 6 3285 bp 69.53 14.70 90.50
Displaying items 151-200 of 267 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.