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PLM4_65_b1_sep16_Acidobacteria_68_17

PLM4_65cm_b1_redo_sep2016_Bacteria_68_17
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Bacteria

Displaying items 101-150 of 267 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_74433
Domain: Bacteria (100%)
3 3221 bp 68.46 17.32 91.65
PLM4_65_b1_redo_sep16_scaffold_27015
Domain: Bacteria (80%)
5 5736 bp 68.60 17.29 96.04
PLM4_65_b1_redo_sep16_scaffold_12795
Domain: Bacteria (100%)
9 8637 bp 68.10 17.28 96.67
PLM4_65_b1_redo_sep16_scaffold_94994 3 2788 bp 66.50 17.27 92.11
PLM4_65_b1_redo_sep16_scaffold_3262
Phylum: Acidobacteria (63.16%)
19 17520 bp 68.49 17.27 95.77
PLM4_65_b1_redo_sep16_scaffold_8861
Phylum: Acidobacteria (50%)
10 14459 bp 67.11 17.27 88.84
PLM4_65_b1_redo_sep16_scaffold_4277
Phylum: Acidobacteria (50%)
12 15227 bp 68.57 17.23 97.60
PLM4_65_b1_redo_sep16_scaffold_9430
Phylum: Acidobacteria (62.5%)
8 10144 bp 66.57 17.21 81.77
PLM4_65_b1_redo_sep16_scaffold_1895
Domain: Bacteria (80%)
20 22961 bp 67.61 17.19 95.13
PLM4_65_b1_redo_sep16_scaffold_98385
Species: Cystobacter violaceus (50%)
2 2731 bp 68.29 17.19 97.11
PLM4_65_b1_redo_sep16_scaffold_219835
Species: RBG_13_OP8X_37_8_curated (50%)
4 3126 bp 69.23 17.18 99.14
PLM4_65_b1_redo_sep16_scaffold_9623
Domain: Bacteria (100%)
10 10336 bp 67.68 17.14 87.68
PLM4_65_b1_redo_sep16_scaffold_7564
Domain: Bacteria (83.33%)
12 11488 bp 67.04 17.14 96.15
PLM4_65_b1_redo_sep16_scaffold_50267
Domain: Bacteria (80%)
5 4053 bp 67.46 17.10 96.97
PLM4_65_b1_redo_sep16_scaffold_14631
Phylum: Acidobacteria (50%)
8 8031 bp 69.31 17.09 96.00
PLM4_65_b1_redo_sep16_scaffold_20201
Domain: Bacteria (50%)
4 6728 bp 70.33 17.06 96.14
PLM4_65_b1_redo_sep16_scaffold_105182
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 2624 bp 71.42 17.04 99.70
PLM4_65_b1_redo_sep16_scaffold_16220
Phylum: Acidobacteria (66.67%)
9 7589 bp 67.36 17.02 89.14
PLM4_65_b1_redo_sep16_scaffold_2028
Domain: Bacteria (94.74%)
19 22232 bp 68.76 17.01 94.69
PLM4_65_b1_redo_sep16_scaffold_19631
Phylum: Acidobacteria (100%)
6 6845 bp 67.25 17.01 94.89
PLM4_65_b1_redo_sep16_scaffold_2427
Domain: Bacteria (78.95%)
19 20342 bp 68.33 17.00 94.59
PLM4_65_b1_redo_sep16_scaffold_18412
Domain: Bacteria (100%)
8 7089 bp 66.46 16.99 92.93
PLM4_65_b1_redo_sep16_scaffold_1096
Domain: Bacteria (88.24%)
51 53778 bp 68.66 16.97 94.07
PLM4_65_b1_redo_sep16_scaffold_2537
Domain: Bacteria (90.48%)
21 20747 bp 68.26 16.93 94.41
PLM4_65_b1_redo_sep16_scaffold_28575
Domain: Bacteria (87.5%)
8 5566 bp 68.09 16.90 96.59
PLM4_65_b1_redo_sep16_scaffold_1741
Domain: Bacteria (90.91%)
44 43616 bp 68.52 16.88 94.00
PLM4_65_b1_redo_sep16_scaffold_2086
Domain: Bacteria (75%)
12 22441 bp 68.74 16.86 97.55
PLM4_65_b1_redo_sep16_scaffold_13932
Domain: Bacteria (100%)
8 8240 bp 65.52 16.84 97.17
PLM4_65_b1_redo_sep16_scaffold_22526
Domain: Bacteria (83.33%)
6 6346 bp 68.03 16.83 78.14
PLM4_65_b1_redo_sep16_scaffold_90326
Domain: Bacteria (66.67%)
3 2872 bp 70.09 16.82 100.17
PLM4_65_b1_redo_sep16_scaffold_5991
Domain: Bacteria (92.31%)
13 13409 bp 66.70 16.79 89.94
PLM4_65_b1_redo_sep16_scaffold_6814
Domain: Bacteria (85.71%)
14 12480 bp 67.72 16.77 92.29
PLM4_65_b1_redo_sep16_scaffold_41624
Phylum: Firmicutes (60%)
5 4700 bp 70.28 16.72 94.79
PLM4_65_b1_redo_sep16_scaffold_25716 12 9933 bp 66.53 16.70 99.28
PLM4_65_b1_redo_sep16_scaffold_28969 6 5526 bp 67.01 16.69 90.72
PLM4_65_b1_redo_sep16_scaffold_23223
Domain: Bacteria (100%)
5 6236 bp 70.43 16.67 100.74
PLM4_65_b1_redo_sep16_scaffold_2255
Domain: Bacteria (91.43%)
35 35829 bp 68.22 16.65 95.03
PLM4_65_b1_redo_sep16_scaffold_9890
Domain: Bacteria (100%)
15 16729 bp 68.20 16.64 96.01
PLM4_65_b1_redo_sep16_scaffold_4731
Domain: Bacteria (92.31%)
13 14461 bp 68.84 16.58 96.55
PLM4_65_b1_redo_sep16_scaffold_95108
Domain: Bacteria (85.71%)
7 5032 bp 69.24 16.54 83.35
PLM4_65_b1_redo_sep16_scaffold_14645
Domain: Bacteria (83.33%)
6 8028 bp 68.72 16.50 97.61
PLM4_65_b1_redo_sep16_scaffold_147497
Species: RBG_13_Acidobacteria_68_16_curated (50%)
2 3348 bp 70.49 16.49 92.56
PLM4_65_b1_redo_sep16_scaffold_1454
Domain: Bacteria (80%)
25 26035 bp 67.91 16.45 94.56
PLM4_65_b1_redo_sep16_scaffold_61030
Domain: Bacteria (85.71%)
7 7104 bp 67.95 16.43 92.40
PLM4_65_b1_redo_sep16_scaffold_3490
Domain: Bacteria (70%)
20 16921 bp 68.07 16.43 91.46
PLM4_65_b1_redo_sep16_scaffold_9212
Phylum: Acidobacteria (55.56%)
9 10264 bp 66.89 16.40 99.06
PLM4_65_b1_redo_sep16_scaffold_4435
Domain: Bacteria (90%)
10 14985 bp 69.58 16.39 97.74
PLM4_65_b1_redo_sep16_scaffold_60719 6 3627 bp 69.26 16.38 98.01
PLM4_65_b1_redo_sep16_scaffold_26979
Domain: Bacteria (88.89%)
9 6096 bp 67.93 16.36 95.08
PLM4_65_b1_redo_sep16_scaffold_6636
Domain: Bacteria (95%)
20 21804 bp 69.34 16.34 98.61
Displaying items 101-150 of 267 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.