ggKbase home page

PLM4_65_b1_sep16_Acidobacteria_68_17

PLM4_65cm_b1_redo_sep2016_Bacteria_68_17
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Bacteria

Displaying items 251-267 of 267 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_2827
Domain: Bacteria (85%)
20 18854 bp 69.07 19.03 94.55
PLM4_65_b1_redo_sep16_scaffold_3593
Domain: Bacteria (91.67%)
12 16684 bp 69.12 19.09 90.88
PLM4_65_b1_redo_sep16_scaffold_7482
Domain: Bacteria (80%)
10 11403 bp 67.17 19.13 92.37
PLM4_65_b1_redo_sep16_scaffold_5702
Domain: Bacteria (72.73%)
11 15688 bp 66.50 19.22 94.79
PLM4_65_b1_redo_sep16_scaffold_744
Domain: Bacteria (87.88%)
33 35041 bp 68.86 19.26 92.56
PLM4_65_b1_redo_sep16_scaffold_7530
Phylum: Acidobacteria (66.67%)
9 11363 bp 67.02 19.26 92.80
PLM4_65_b1_redo_sep16_scaffold_906
Domain: Bacteria (81.82%)
33 32248 bp 67.03 19.27 93.62
PLM4_65_b1_redo_sep16_scaffold_3198
Phylum: Acidobacteria (52.94%)
17 17701 bp 65.05 19.47 94.80
PLM4_65_b1_redo_sep16_scaffold_7347
Domain: Bacteria (100%)
8 11502 bp 68.51 19.54 96.61
PLM4_65_b1_redo_sep16_scaffold_590
Domain: Bacteria (82%)
50 46046 bp 68.72 19.60 94.18
PLM4_65_b1_redo_sep16_scaffold_6488
Domain: Bacteria (72.22%)
18 12284 bp 67.67 19.61 91.02
PLM4_65_b1_redo_sep16_scaffold_31598
Domain: Bacteria (100%)
6 5477 bp 67.72 19.61 90.16
PLM4_65_b1_redo_sep16_scaffold_3897
Domain: Bacteria (92.31%)
13 15962 bp 66.70 19.66 87.38
PLM4_65_b1_redo_sep16_scaffold_7687
Domain: Bacteria (90%)
10 11247 bp 67.83 19.71 95.65
PLM4_65_b1_redo_sep16_scaffold_7473
Domain: Bacteria (81.82%)
11 11410 bp 65.99 20.17 89.61
PLM4_65_b1_redo_sep16_scaffold_22958
Phylum: Acidobacteria (57.14%)
7 6280 bp 68.23 20.35 96.69
PLM4_65_b1_redo_sep16_scaffold_10533
Phylum: Acidobacteria (63.64%)
11 9705 bp 67.02 21.62 93.85
Displaying items 251-267 of 267 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.