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PLM4_65_b1_sep16_Alphaproteobacteria_Rhodospirillales_68_15

PLM4_65cm_b1_redo_sep2016_Alphaproteobacteria_68_15
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 472 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_6104
Order: Rhodospirillales (64.29%)
14 13673 bp 69.70 15.03 87.68
PLM4_65_b1_redo_sep16_scaffold_5129
Class: Alphaproteobacteria (62.5%)
8 13853 bp 66.32 15.04 95.57
PLM4_65_b1_redo_sep16_scaffold_1776
Class: Alphaproteobacteria (50%)
24 23727 bp 67.29 15.04 88.85
PLM4_65_b1_redo_sep16_scaffold_25569
Class: Alphaproteobacteria (78.57%)
14 11599 bp 65.84 15.04 90.94
PLM4_65_b1_redo_sep16_scaffold_10513
Phylum: Proteobacteria (54.55%)
11 9582 bp 68.04 15.04 84.31
PLM4_65_b1_redo_sep16_scaffold_55390
Class: Alphaproteobacteria (57.14%)
7 5113 bp 66.71 15.05 79.09
PLM4_65_b1_redo_sep16_scaffold_2073
Class: Alphaproteobacteria (71.43%)
21 22027 bp 67.35 15.05 86.33
PLM4_65_b1_redo_sep16_scaffold_6096
Phylum: Proteobacteria (69.23%)
13 12688 bp 67.48 15.05 95.24
PLM4_65_b1_redo_sep16_scaffold_7632
Phylum: Proteobacteria (55.56%)
9 11285 bp 69.04 15.06 92.49
PLM4_65_b1_redo_sep16_scaffold_39709
Class: Alphaproteobacteria (71.43%)
7 4997 bp 69.90 15.07 82.07
PLM4_65_b1_redo_sep16_scaffold_14875
Phylum: Proteobacteria (77.78%)
9 7954 bp 63.72 15.07 87.58
PLM4_65_b1_redo_sep16_scaffold_2101
Phylum: Proteobacteria (77.27%)
22 21879 bp 65.51 15.08 93.38
PLM4_65_b1_redo_sep16_scaffold_7980
Class: Alphaproteobacteria (77.78%)
9 11058 bp 68.11 15.08 87.19
PLM4_65_b1_redo_sep16_scaffold_42140
Order: Rhodospirillales (66.67%)
6 4487 bp 64.68 15.08 91.60
PLM4_65_b1_redo_sep16_scaffold_1764
Class: Alphaproteobacteria (65.52%)
29 29551 bp 68.33 15.09 86.44
PLM4_65_b1_redo_sep16_scaffold_3324
Phylum: Proteobacteria (66.67%)
21 17876 bp 68.60 15.10 93.96
PLM4_65_b1_redo_sep16_scaffold_6440
Domain: Bacteria (61.11%)
18 12330 bp 69.00 15.10 81.27
PLM4_65_b1_redo_sep16_scaffold_3740
Order: Rhodospirillales (78.57%)
14 16298 bp 68.01 15.11 93.03
PLM4_65_b1_redo_sep16_scaffold_7672
Order: Rhodospirillales (61.54%)
13 12360 bp 67.57 15.11 82.82
PLM4_65_b1_redo_sep16_scaffold_2154
Class: Alphaproteobacteria (57.14%)
21 21608 bp 67.68 15.12 94.06
PLM4_65_b1_redo_sep16_scaffold_23134
Class: Alphaproteobacteria (55.56%)
9 6251 bp 69.48 15.12 83.63
PLM4_65_b1_redo_sep16_scaffold_18105
Phylum: Proteobacteria (50%)
8 7149 bp 70.61 15.15 93.87
PLM4_65_b1_redo_sep16_scaffold_3872
Order: Rhodospirillales (76.19%)
21 16024 bp 68.40 15.15 91.34
PLM4_65_b1_redo_sep16_scaffold_836
Class: Alphaproteobacteria (64.1%)
39 33841 bp 67.83 15.15 88.97
PLM4_65_b1_redo_sep16_scaffold_16538
Order: Rhodospirillales (50%)
8 7504 bp 68.36 15.17 89.07
PLM4_65_b1_redo_sep16_scaffold_790
Phylum: Proteobacteria (80.65%)
31 34355 bp 69.13 15.17 92.96
PLM4_65_b1_redo_sep16_scaffold_21485
Class: Alphaproteobacteria (100%)
7 6506 bp 67.68 15.19 82.91
PLM4_65_b1_redo_sep16_scaffold_18804
Phylum: Proteobacteria (62.5%)
8 7008 bp 67.69 15.20 84.47
PLM4_65_b1_redo_sep16_scaffold_3518
Order: Rhodospirillales (61.11%)
18 16863 bp 69.12 15.20 89.71
PLM4_65_b1_redo_sep16_scaffold_15216
Domain: Bacteria (71.43%)
7 8331 bp 67.71 15.20 84.97
PLM4_65_b1_redo_sep16_scaffold_2930
Class: Alphaproteobacteria (55.56%)
18 18538 bp 69.20 15.20 92.40
PLM4_65_b1_redo_sep16_scaffold_36867
Class: Alphaproteobacteria (66.67%)
9 7024 bp 68.69 15.21 77.73
PLM4_65_b1_redo_sep16_scaffold_1719
Domain: Bacteria (64.29%)
28 24050 bp 68.69 15.21 86.81
PLM4_65_b1_redo_sep16_scaffold_3161
Class: Alphaproteobacteria (60%)
30 29009 bp 67.90 15.21 90.02
PLM4_65_b1_redo_sep16_scaffold_22582
Order: Rhodospirillales (66.67%)
6 6337 bp 69.18 15.22 92.27
PLM4_65_b1_redo_sep16_scaffold_53268
Domain: Bacteria (80%)
5 3917 bp 69.21 15.24 91.68
PLM4_65_b1_redo_sep16_scaffold_23424
Phylum: Proteobacteria (57.14%)
7 6209 bp 69.98 15.24 92.14
PLM4_65_b1_redo_sep16_scaffold_19107
Phylum: Proteobacteria (100%)
8 6947 bp 69.22 15.24 93.80
PLM4_65_b1_redo_sep16_scaffold_10697
Class: Alphaproteobacteria (66.67%)
12 9490 bp 68.07 15.24 89.46
PLM4_65_b1_redo_sep16_scaffold_1788
Class: Alphaproteobacteria (76.19%)
21 26188 bp 67.96 15.24 86.17
PLM4_65_b1_redo_sep16_scaffold_14276
Class: Alphaproteobacteria (72.73%)
11 11114 bp 69.30 15.26 92.69
PLM4_65_b1_redo_sep16_scaffold_62702 5 3561 bp 68.46 15.29 65.54
PLM4_65_b1_redo_sep16_scaffold_16528
Phylum: Proteobacteria (55.56%)
9 7507 bp 69.35 15.31 84.96
PLM4_65_b1_redo_sep16_scaffold_2524
Class: Alphaproteobacteria (52.38%)
21 20233 bp 68.27 15.32 88.25
PLM4_65_b1_redo_sep16_scaffold_38689
Class: Alphaproteobacteria (60%)
10 7102 bp 65.33 15.33 83.64
PLM4_65_b1_redo_sep16_scaffold_5978
Order: Rhodospirillales (69.23%)
13 12812 bp 68.39 15.34 89.14
PLM4_65_b1_redo_sep16_scaffold_11218
Order: Rhodospirillales (55.56%)
9 9239 bp 69.04 15.34 95.66
PLM4_65_b1_redo_sep16_scaffold_4312
Phylum: Proteobacteria (78.57%)
28 27401 bp 67.44 15.36 87.70
PLM4_65_b1_redo_sep16_scaffold_1752
Class: Alphaproteobacteria (52.17%)
23 23901 bp 67.37 15.36 89.13
PLM4_65_b1_redo_sep16_scaffold_17601
Class: Alphaproteobacteria (50%)
10 7266 bp 69.36 15.36 83.57
Displaying items 251-300 of 472 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.