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PLM4_65_b1_sep16_Alphaproteobacteria_Rhodospirillales_68_15

PLM4_65cm_b1_redo_sep2016_Alphaproteobacteria_68_15
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 472 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_8546
Order: Rhodospirillales (50%)
10 10664 bp 70.15 15.37 93.90
PLM4_65_b1_redo_sep16_scaffold_41142
Order: Rhodospirillales (75%)
4 4547 bp 68.13 15.37 93.56
PLM4_65_b1_redo_sep16_scaffold_4753
Class: Alphaproteobacteria (70.59%)
17 14425 bp 67.80 15.37 86.72
PLM4_65_b1_redo_sep16_scaffold_44772
Class: Betaproteobacteria (50%)
4 4722 bp 70.08 15.37 92.76
PLM4_65_b1_redo_sep16_scaffold_50810
Order: Rhodospirillales (50%)
4 4028 bp 67.60 15.38 83.71
PLM4_65_b1_redo_sep16_scaffold_85935
Order: Rhodospirillales (50%)
4 3336 bp 70.29 15.38 92.09
PLM4_65_b1_redo_sep16_scaffold_35800
Class: Alphaproteobacteria (71.43%)
7 4921 bp 69.90 15.39 79.50
PLM4_65_b1_redo_sep16_scaffold_2750
Order: Rhodospirillales (50%)
16 19102 bp 67.36 15.39 89.14
PLM4_65_b1_redo_sep16_scaffold_9251
Class: Betaproteobacteria (77.78%)
9 10245 bp 66.61 15.40 93.29
PLM4_65_b1_redo_sep16_scaffold_64774
Class: Alphaproteobacteria (66.67%)
3 3494 bp 69.32 15.41 74.27
PLM4_65_b1_redo_sep16_scaffold_5045
Order: Rhodospirillales (64.29%)
14 14005 bp 69.07 15.42 89.07
PLM4_65_b1_redo_sep16_scaffold_19097
Genus: Phaeospirillum (66.67%)
3 6950 bp 70.29 15.43 95.65
PLM4_65_b1_redo_sep16_scaffold_20130
Order: Rhodobacterales (50%)
6 6742 bp 66.63 15.44 87.88
PLM4_65_b1_redo_sep16_scaffold_3305
Class: Alphaproteobacteria (56.25%)
16 19204 bp 68.90 15.46 89.26
PLM4_65_b1_redo_sep16_scaffold_2941
Class: Alphaproteobacteria (58.82%)
34 26378 bp 68.19 15.47 88.49
PLM4_65_b1_redo_sep16_scaffold_8152
Phylum: Proteobacteria (63.64%)
11 10928 bp 67.59 15.47 87.46
PLM4_65_b1_redo_sep16_scaffold_25658
Order: Rhodospirillales (50%)
4 5901 bp 69.09 15.51 92.58
PLM4_65_b1_redo_sep16_scaffold_3988
Class: Alphaproteobacteria (56.25%)
32 28567 bp 67.09 15.51 84.46
PLM4_65_b1_redo_sep16_scaffold_4908
Phylum: Proteobacteria (64.29%)
14 15817 bp 68.19 15.51 89.49
PLM4_65_b1_redo_sep16_scaffold_47788
Class: Betaproteobacteria (50%)
6 4174 bp 69.31 15.52 73.67
PLM4_65_b1_redo_sep16_scaffold_9302
Class: Alphaproteobacteria (50%)
12 10217 bp 66.65 15.55 80.31
PLM4_65_b1_redo_sep16_scaffold_29053
Species: RLO_Betaproteobacteria_68_19 (80%)
5 5517 bp 68.62 15.55 94.83
PLM4_65_b1_redo_sep16_scaffold_6402
Order: Rhodospirillales (60%)
20 23324 bp 67.57 15.55 91.70
PLM4_65_b1_redo_sep16_scaffold_23255
Class: Alphaproteobacteria (62.5%)
8 6542 bp 69.76 15.57 90.94
PLM4_65_b1_redo_sep16_scaffold_7201
Class: Alphaproteobacteria (60%)
20 16912 bp 68.71 15.57 81.42
PLM4_65_b1_redo_sep16_scaffold_1140
Order: Rhodospirillales (51.61%)
31 37554 bp 68.84 15.58 88.01
PLM4_65_b1_redo_sep16_scaffold_23484
Class: Alphaproteobacteria (87.5%)
8 6469 bp 69.62 15.58 88.58
PLM4_65_b1_redo_sep16_scaffold_40317
Order: Rhodospirillales (60%)
5 4600 bp 68.24 15.59 79.96
PLM4_65_b1_redo_sep16_scaffold_1220
Phylum: Proteobacteria (96.15%)
26 28439 bp 64.33 15.59 90.84
PLM4_65_b1_redo_sep16_scaffold_5003
Order: Rhodospirillales (72.73%)
11 14070 bp 70.03 15.59 91.79
PLM4_65_b1_redo_sep16_scaffold_8470
Class: Alphaproteobacteria (78.95%)
19 21023 bp 69.37 15.60 92.50
PLM4_65_b1_redo_sep16_scaffold_2059
Phylum: Proteobacteria (77.27%)
22 22083 bp 66.79 15.60 93.94
PLM4_65_b1_redo_sep16_scaffold_5975
Order: Rhodospirillales (52.94%)
17 16617 bp 68.32 15.61 79.17
PLM4_65_b1_redo_sep16_scaffold_3538
Order: Rhodospirillales (81.25%)
16 17716 bp 68.57 15.63 94.25
PLM4_65_b1_redo_sep16_scaffold_39866
Class: Alphaproteobacteria (57.14%)
7 4632 bp 69.47 15.64 88.28
PLM4_65_b1_redo_sep16_scaffold_21083
Phylum: Proteobacteria (62.5%)
8 6575 bp 66.83 15.65 86.37
PLM4_65_b1_redo_sep16_scaffold_20631
Phylum: Proteobacteria (71.43%)
7 6657 bp 68.36 15.66 85.89
PLM4_65_b1_redo_sep16_scaffold_2365
Order: Rhodospirillales (71.43%)
28 28419 bp 68.13 15.67 91.81
PLM4_65_b1_redo_sep16_scaffold_6276
Phylum: Proteobacteria (71.43%)
14 15214 bp 66.30 15.69 88.12
PLM4_65_b1_redo_sep16_scaffold_38619 5 5011 bp 68.95 15.69 85.67
PLM4_65_b1_redo_sep16_scaffold_4321
Class: Betaproteobacteria (66.67%)
15 15154 bp 67.67 15.71 94.33
PLM4_65_b1_redo_sep16_scaffold_3781
Phylum: Proteobacteria (80%)
15 16209 bp 66.80 15.73 93.32
PLM4_65_b1_redo_sep16_scaffold_1339
Order: Rhodospirillales (59.38%)
32 27263 bp 68.69 15.74 89.48
PLM4_65_b1_redo_sep16_scaffold_1786
Class: Alphaproteobacteria (62.5%)
24 23652 bp 67.70 15.75 86.10
PLM4_65_b1_redo_sep16_scaffold_10926
Order: Rhodospirillales (84.62%)
13 9381 bp 67.70 15.77 91.37
PLM4_65_b1_redo_sep16_scaffold_1613
Phylum: Proteobacteria (65.38%)
26 24871 bp 67.83 15.77 90.42
PLM4_65_b1_redo_sep16_scaffold_88552
Order: Rhodospirillales (75%)
4 2907 bp 70.55 15.79 93.29
PLM4_65_b1_redo_sep16_scaffold_4530
Order: Rhodospirillales (52.94%)
17 14825 bp 68.48 15.79 89.73
PLM4_65_b1_redo_sep16_scaffold_104003
Order: Burkholderiales (50%)
4 3238 bp 67.42 15.80 92.37
PLM4_65_b1_redo_sep16_scaffold_771
Class: Alphaproteobacteria (56.76%)
37 34720 bp 65.82 15.80 86.88
Displaying items 301-350 of 472 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.