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PLM4_65_b1_sep16_Alphaproteobacteria_Rhodospirillales_68_15

PLM4_65cm_b1_redo_sep2016_Alphaproteobacteria_68_15
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 401-450 of 472 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_2510
Order: Rhodospirillales (52.94%)
17 19978 bp 68.64 16.25 93.66
PLM4_65_b1_redo_sep16_scaffold_45474
Class: Alphaproteobacteria (57.14%)
7 4699 bp 67.78 16.25 84.21
PLM4_65_b1_redo_sep16_scaffold_2733
Phylum: Proteobacteria (64.71%)
17 19162 bp 67.46 16.25 93.92
PLM4_65_b1_redo_sep16_scaffold_1129
Order: Rhodospirillales (54.05%)
37 40625 bp 68.68 16.26 86.61
PLM4_65_b1_redo_sep16_scaffold_2377
Class: Alphaproteobacteria (66.67%)
21 20574 bp 68.49 16.28 89.81
PLM4_65_b1_redo_sep16_scaffold_17921
Class: Alphaproteobacteria (71.43%)
7 7190 bp 69.22 16.29 96.09
PLM4_65_b1_redo_sep16_scaffold_7485
Order: Rhodospirillales (92.31%)
13 11789 bp 68.56 16.29 90.59
PLM4_65_b1_redo_sep16_scaffold_5127
Order: Rhodospirillales (92.31%)
13 13855 bp 69.25 16.33 93.93
PLM4_65_b1_redo_sep16_scaffold_2210
Order: Rhodospirillales (68.18%)
22 24044 bp 69.21 16.33 95.46
PLM4_65_b1_redo_sep16_scaffold_650
Class: Alphaproteobacteria (60.61%)
33 37463 bp 67.80 16.36 90.62
PLM4_65_b1_redo_sep16_scaffold_31761
Order: Rhodospirillales (66.67%)
6 5514 bp 69.06 16.40 90.53
PLM4_65_b1_redo_sep16_scaffold_19682
Class: Alphaproteobacteria (57.14%)
7 6833 bp 62.46 16.40 70.03
PLM4_65_b1_redo_sep16_scaffold_3155
Class: Alphaproteobacteria (72.22%)
18 17819 bp 68.82 16.41 94.33
PLM4_65_b1_redo_sep16_scaffold_16490
Class: Betaproteobacteria (80%)
5 7517 bp 69.12 16.42 92.35
PLM4_65_b1_redo_sep16_scaffold_2912
Order: Rhodospirillales (67.74%)
31 18611 bp 67.37 16.44 94.03
PLM4_65_b1_redo_sep16_scaffold_8584
Phylum: Proteobacteria (72.73%)
11 10633 bp 67.22 16.45 87.41
PLM4_65_b1_redo_sep16_scaffold_2576
Order: Rhodospirillales (70.59%)
17 19733 bp 66.71 16.48 93.12
PLM4_65_b1_redo_sep16_scaffold_23934
Class: Betaproteobacteria (50%)
8 6132 bp 68.59 16.49 97.21
PLM4_65_b1_redo_sep16_scaffold_23463
Class: Alphaproteobacteria (50%)
10 6202 bp 66.72 16.49 74.20
PLM4_65_b1_redo_sep16_scaffold_46687
Species: R_Betaproteobacteria_63_19 (50%)
4 4229 bp 68.12 16.49 80.73
PLM4_65_b1_redo_sep16_scaffold_2702
Class: Alphaproteobacteria (77.27%)
22 19317 bp 68.57 16.53 93.10
PLM4_65_b1_redo_sep16_scaffold_11629
Order: Rhodospirillales (66.67%)
6 9069 bp 67.68 16.54 96.03
PLM4_65_b1_redo_sep16_scaffold_56833
Phylum: Proteobacteria (80%)
5 3772 bp 68.45 16.58 95.36
PLM4_65_b1_redo_sep16_scaffold_13134
Class: Betaproteobacteria (50%)
8 8512 bp 68.24 16.58 89.59
PLM4_65_b1_redo_sep16_scaffold_3577
Class: Alphaproteobacteria (80%)
15 16968 bp 67.80 16.58 92.52
PLM4_65_b1_redo_sep16_scaffold_7538
Order: Rhodospirillales (76.92%)
13 11358 bp 68.94 16.61 81.59
PLM4_65_b1_redo_sep16_scaffold_28392
Phylum: Proteobacteria (80%)
5 5586 bp 66.83 16.62 86.63
PLM4_65_b1_redo_sep16_scaffold_72709
Class: Alphaproteobacteria (50%)
8 5730 bp 69.70 16.62 79.63
PLM4_65_b1_redo_sep16_scaffold_7999
Order: Rhodospirillales (77.78%)
9 11044 bp 68.48 16.65 94.75
PLM4_65_b1_redo_sep16_scaffold_7821
Phylum: Proteobacteria (87.5%)
8 11155 bp 67.40 16.65 96.47
PLM4_65_b1_redo_sep16_scaffold_28502
Class: Alphaproteobacteria (62.5%)
8 8094 bp 66.39 16.66 96.63
PLM4_65_b1_redo_sep16_scaffold_13685
Species: R_Betaproteobacteria_62_17 (50%)
8 8327 bp 63.66 16.66 82.14
PLM4_65_b1_redo_sep16_scaffold_14883
Class: Alphaproteobacteria (71.43%)
7 7953 bp 68.43 16.67 88.04
PLM4_65_b1_redo_sep16_scaffold_54163
Species: R_Alphaproteobacteria_66_14 (60%)
5 3879 bp 67.83 16.67 96.75
PLM4_65_b1_redo_sep16_scaffold_15588
Phylum: Proteobacteria (60%)
10 7755 bp 65.82 16.71 84.68
PLM4_65_b1_redo_sep16_scaffold_8191
Phylum: Proteobacteria (55.56%)
9 10898 bp 67.71 16.72 95.55
PLM4_65_b1_redo_sep16_scaffold_5156
Phylum: Proteobacteria (92.31%)
13 13816 bp 67.80 16.72 86.49
PLM4_65_b1_redo_sep16_scaffold_26836
Phylum: Proteobacteria (62.5%)
8 5759 bp 67.29 16.72 92.10
PLM4_65_b1_redo_sep16_scaffold_31242
Species: R_Alphaproteobacteria_66_14 (50%)
2 5300 bp 68.62 16.73 96.85
PLM4_65_b1_redo_sep16_scaffold_6021
Class: Alphaproteobacteria (64.71%)
17 12771 bp 68.40 16.76 91.78
PLM4_65_b1_redo_sep16_scaffold_2305
Class: Alphaproteobacteria (52.63%)
19 20903 bp 67.61 16.78 91.14
PLM4_65_b1_redo_sep16_scaffold_910
Phylum: Proteobacteria (79.71%)
69 69157 bp 66.77 16.85 90.11
PLM4_65_b1_redo_sep16_scaffold_6491
Class: Alphaproteobacteria (50%)
10 12283 bp 69.12 16.85 89.07
PLM4_65_b1_redo_sep16_scaffold_33034
Order: Rhodospirillales (100%)
7 5429 bp 66.96 16.85 87.03
PLM4_65_b1_redo_sep16_scaffold_5904
Class: Alphaproteobacteria (54.55%)
11 12877 bp 67.89 16.87 92.14
PLM4_65_b1_redo_sep16_scaffold_5532
Class: Alphaproteobacteria (55.56%)
18 17281 bp 68.07 16.87 95.55
PLM4_65_b1_redo_sep16_scaffold_64243
Class: Betaproteobacteria (50%)
4 3511 bp 66.88 16.88 88.01
PLM4_65_b1_redo_sep16_scaffold_40008
Order: Rhodospirillales (60%)
5 4622 bp 68.30 16.91 85.55
PLM4_65_b1_redo_sep16_scaffold_43287
Phylum: Proteobacteria (50%)
8 4419 bp 67.48 16.94 77.80
PLM4_65_b1_redo_sep16_scaffold_2925
Class: Alphaproteobacteria (62.5%)
16 18552 bp 68.12 16.96 89.84
Displaying items 401-450 of 472 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.