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PLM4_65_b1_redo_sep16_scaffold_2340_14

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(12908..13684)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATPase (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 253.0
  • Bit_score: 319
  • Evalue 5.30e-85
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 238.0
  • Bit_score: 325
  • Evalue 2.60e-86
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 243.0
  • Bit_score: 423
  • Evalue 1.30e-115

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Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 777
TTGAACACGCCGCCCGGCCCTCAGACACCGGCGCGCGAGCCGCGCGTGCTGCGCGCGTCGGCGCTCACGAAGTCCTACGGGCGCAGGGTGGTCGTGCGCGACGTCGAGCTCGAGATCCGCCAGGGCGAGGTGGTGGGCCTTTTGGGCCCGAACGGCGCCGGCAAGACCACGACCTTCTACATGGTGGTGGGGCTCGCGCGACCCGACGCGGGCAGCGTCACGCTCGGAGGGGCGGACATCACCGGGATGCCGATGTACCAGCGCGCGCGCGCCGGGATCGGCTACCTGCCCCAGGAAGCGAGCGTCTTCCGCAAGCTGACCACCGAGGAGAACGTGCTCGCGATCCTCGAGACGCGCGGCCTTCCCGCGGCGGAGCAGCGCGCCCAGGCCCGGGAGCTGCTCGACGAGCTCGGGATCCACGCGATGGCGCGCCAGCCCGCGTACACGCTGTCGGGCGGCGAGCGCAGGCGGCTCGAGATCTGCCGCGCGCTCGCGGCGCAGCCCTCGTTCATCCTGCTCGACGAGCCCTTCGCCGGGATCGATCCGATCGCGGTGATCGACATCCAGAAGATCATCGCGCACCTGCGCGACCGCGGCATCGGCGTCCTGATCACGGACCACAACGTGCGCGAGACCTTGAAAATAACGGATCGGGCCTATATTCTGAGGGACGGCAATGTGTTCCGCTCTGGTACACCGCAGGAGCTCGCCTCGGATCCCGAGGTGCGGCGCGTCTACCTCGGAGAAGGATTCCGTCTCGATGGCCGTGAGGCCTGA
PROTEIN sequence
Length: 259
LNTPPGPQTPAREPRVLRASALTKSYGRRVVVRDVELEIRQGEVVGLLGPNGAGKTTTFYMVVGLARPDAGSVTLGGADITGMPMYQRARAGIGYLPQEASVFRKLTTEENVLAILETRGLPAAEQRAQARELLDELGIHAMARQPAYTLSGGERRRLEICRALAAQPSFILLDEPFAGIDPIAVIDIQKIIAHLRDRGIGVLITDHNVRETLKITDRAYILRDGNVFRSGTPQELASDPEVRRVYLGEGFRLDGREA*