ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_393_1
unknown

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

623..1885
DNA (1263bp) protein (421aa)
Oligopeptide-binding lipoprotein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WDA9_9ACTO
oligopeptide-binding lipoprotein
Oligopeptide-binding lipoprotein {ECO:0000313|EMBL:AGZ45936.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_393_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1918..4002
DNA (2085bp) protein (695aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WA83_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45937.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_393_4
unknown

Not on your lists

comp(4449..5852)
DNA (1404bp) protein (468aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_5
unknown

Not on your lists

6283..6510
DNA (228bp) protein (76aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_6
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7139..7501)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JVI2_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH29981.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_393_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7780..9624
DNA (1845bp) protein (615aa)
Chitinase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AUP3_STRRD
chitinase-like protein
Chitinase-like protein {ECO:0000313|EMBL:ACZ84905.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_393_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9695..11731
DNA (2037bp) protein (679aa)
Chitinase {ECO:0000313|EMBL:CEL21835.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CEL21835.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036AB135
chitinase
PLM1_60_b1_redo_sep16_scaffold_393_9
unknown

Not on your lists

comp(11762..12991)
DNA (1230bp) protein (410aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12991..14985)
DNA (1995bp) protein (665aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00037976BF
Uncharacterized protein {ECO:0000313|EMBL:CCH19793.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_11
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15111..15935
DNA (825bp) protein (275aa)
AraC family transcriptional regulator Tax=Streptomyces chartreusis RepID=UPI000262EFF5
Putative HTH-type transcriptional regulator in mcrB 3'region {ECO:0000313|EMBL:EPJ33956.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
AraC family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_393_12
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15943..16362
DNA (420bp) protein (140aa)
glyoxalase Tax=Streptomyces chartreusis RepID=UPI000262EFF4
Glyoxalase {ECO:0000313|EMBL:KDN74491.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16359..18641)
DNA (2283bp) protein (761aa)
Putative signaling protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SKQ3_ACTS5
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:AEV85770.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_393_14
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18843..19976
DNA (1134bp) protein (378aa)
carnitine dehydratase Tax=Rhodococcus opacus RepID=UPI00029CD0BE
Alpha-methylacyl-CoA racemase
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:AHK28804.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM1_60_b1_redo_sep16_scaffold_393_15
unknown

Not on your lists

20142..21050
DNA (909bp) protein (303aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_16
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21120..21713)
DNA (594bp) protein (198aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00035D96C3
adenylate kinase
PLM1_60_b1_redo_sep16_scaffold_393_17
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21889..22533)
DNA (645bp) protein (215aa)
DeoR family transcriptional regulator Tax=Streptomyces viridosporus RepID=UPI0002EC6F55
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EFL42874.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
carboxymethylenebutenolidase
PLM1_60_b1_redo_sep16_scaffold_393_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22626..23357
DNA (732bp) protein (244aa)
ATP-binding region ATPase domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSS3_PSEUX
ATP-binding protein
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:AEA24526.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_393_19
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23358..23939)
DNA (582bp) protein (194aa)
hypothetical protein Tax=Longispora albida RepID=UPI000360E130
ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:CCH16902.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
clp domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_393_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23940..24176)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9F9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44541.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_393_21
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24242..25525)
DNA (1284bp) protein (428aa)
serine/threonine protein kinase Tax=Streptomyces somaliensis RepID=UPI00029A17C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH33409.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_393_22
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25710..27530
DNA (1821bp) protein (607aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TMT0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP97838.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_23
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27518..28351
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TMT0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP97838.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
PLM1_60_b1_redo_sep16_scaffold_393_24
unknown

Not on your lists

28627..28908
DNA (282bp) protein (94aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_25
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28947..29486
DNA (540bp) protein (180aa)
PEBP family protein Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WER1_ACTMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00627.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_393_26
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29571..29948
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S2C0_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV84796.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_393_27
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30033..30716
DNA (684bp) protein (228aa)
Putative uncharacterized protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HE26_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EDY65087.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_28
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30740..30895)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6QZM8_NOCCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF65390.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
PLM1_60_b1_redo_sep16_scaffold_393_29
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31177..31677
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2QRL9_9PSEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK54741.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM1_60_b1_redo_sep16_scaffold_393_30
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

31886..32227
DNA (342bp) protein (114aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00628};; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /; NBRC 15157 / NCIMB 11770).;"
hypothetical protein Tax=Longispora albida RepID=UPI0003659BC1
Displaying items 1-30 of 68 in total

View Taxonomy