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PLM1_60_b1_redo_sep16_scaffold_393

Search features with annotation key words

Displaying items 31-60 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_393_31
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

32269..33585
DNA (1317bp) protein (439aa)
DNA primase small subunit bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
DNA primase small subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_393_32
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33591..33848)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT47_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26265.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_393_33
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34016..34813
DNA (798bp) protein (266aa)
Alpha/beta hydrolase Tax=Streptomyces sp. Mg1 RepID=B4VDV5_9ACTO
Alpha/beta hydrolase {ECO:0000313|EMBL:EDX26142.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
alpha/beta hydrolase fold protein
PLM1_60_b1_redo_sep16_scaffold_393_34
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34899..35465)
DNA (567bp) protein (189aa)
GCN5-related N-acetyltransferase Tax=Frankia sp. (strain CcI3) RepID=Q2JB65_FRASC
N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD11477.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_393_35
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35450..35827)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Nocardiopsis sp. CNS639 RepID=UPI00037BFD64
Predicted protein {ECO:0000313|EMBL:EFL12448.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_36
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36221..36622)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI0003806CF0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ29911.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_60_b1_redo_sep16_scaffold_393_37
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36601..37983)
DNA (1383bp) protein (461aa)
Asparagine synthase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJ43_ACTMD
asparagine synthase
Asparagine synthase {ECO:0000313|EMBL:ACU40119.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_393_38
unknown

Not on your lists

comp(38057..38200)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_39
unknown

Not on your lists

comp(38430..38633)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_40
unknown

Not on your lists

comp(38858..39139)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_393_41
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39840..40058
DNA (219bp) protein (73aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036C7F6F
Uncharacterized protein {ECO:0000313|EMBL:KHD78899.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_42
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40058..40579
DNA (522bp) protein (174aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000377679C
Uncharacterized protein {ECO:0000313|EMBL:KHD78898.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_43
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40560..41390
DNA (831bp) protein (277aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003653EC7
XRE family transcriptional regulator {ECO:0000313|EMBL:KHD78897.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
XRE family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_393_44
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41595..42716
DNA (1122bp) protein (374aa)
RNA polymerase ECF-subfamily sigma factor Tax=Streptomyces sviceus ATCC 29083 RepID=B5I401_9ACTO
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EDY59806.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
rpoE; RNA polymerase sigma-70 factor, ECF subfamily
PLM1_60_b1_redo_sep16_scaffold_393_45
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42826..43452)
DNA (627bp) protein (209aa)
Bifunctional DNA primase/polymerase Tax=Actinoplanes sp. N902-109 RepID=R4LJ61_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79119.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
bifunctional DNA primase/polymerase
PLM1_60_b1_redo_sep16_scaffold_393_46
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43874..44563)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI0003728FBC
Uncharacterized protein {ECO:0000313|EMBL:KJY26456.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
protein
PLM1_60_b1_redo_sep16_scaffold_393_47
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45058..46356)
DNA (1299bp) protein (433aa)
capsular polysaccharide biosynthesis protein Tax=Salinispora pacifica RepID=UPI000365A965
Putative polyglutamate capsule biosynthesis protein {ECO:0000313|EMBL:EXG81039.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
capsule synthesis protein CapA
PLM1_60_b1_redo_sep16_scaffold_393_48
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46573..47382)
DNA (810bp) protein (270aa)
IclR family transcriptional regulator Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262889A
kdgR; IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AIJ24341.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_393_49
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47638..48699
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000364A028
MFS transporter {ECO:0000313|EMBL:KJK12505.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
major facilitator transporter
PLM1_60_b1_redo_sep16_scaffold_393_50
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48696..49817
DNA (1122bp) protein (374aa)
cupin Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262889B
cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AIJ24340.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_393_51
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49814..50644
DNA (831bp) protein (277aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=Amycolatopsis methanolica RepID=UPI000373354D
hpcE; fumarylacetoacetate hydrolase domain-containing protein 2A
Fumarylacetoacetate hydrolase domain-containing protein 2A {ECO:0000313|EMBL:AIJ24339.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_393_52
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50641..51258
DNA (618bp) protein (206aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0003049E65
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24338.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_393_53
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51286..52473
DNA (1188bp) protein (396aa)
3-hydroxybenzoate 6-hydroxylase Tax=Amycolatopsis methanolica RepID=UPI00037065DA
aromatic-ring hydroxylase (monooxygenase)
Aromatic-ring hydroxylase (Monooxygenase) {ECO:0000313|EMBL:AIJ24337.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_393_54
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52575..53693
DNA (1119bp) protein (373aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RJB6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP70641.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_55
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53736..55238)
DNA (1503bp) protein (501aa)
NADH dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00022922}; EC=1.6.99.5 {ECO:0000256|SAAS:SAAS00022922};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037F1A48
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_56
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55235..56698)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035EF979
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98809.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_393_57
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56698..57357)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZS5_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH09686.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_393_58
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57382..58329)
DNA (948bp) protein (316aa)
formate hydrogenlyase Tax=Actinopolymorpha alba RepID=UPI000368D242
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98807.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_393_59
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58326..60338)
DNA (2013bp) protein (671aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI00036668FC
Hydrogenase subunit {ECO:0000313|EMBL:EWM19205.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_393_60
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60335..60820)
DNA (486bp) protein (162aa)
oxidoreductase Tax=Amycolatopsis benzoatilytica RepID=UPI0003817B3E
Formate hydrogenlyase subunit 7 {ECO:0000313|EMBL:CEL19758.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
Displaying items 31-60 of 68 in total

View Taxonomy