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PLM1_60_b1_redo_sep16_scaffold_393_44

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 41595..42716

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor Tax=Streptomyces sviceus ATCC 29083 RepID=B5I401_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 368.0
  • Bit_score: 535
  • Evalue 3.10e-149
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EDY59806.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 368.0
  • Bit_score: 535
  • Evalue 4.40e-149
rpoE; RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 370.0
  • Bit_score: 517
  • Evalue 2.50e-144

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Taxonomy

Streptomyces sviceus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
GTGGCGTTGCAGCGCTGGCCGCGCGACGGCATCCCCCGCAGGCCGGGTGCCTGGCTGACCACGACGGCGCGTAACCGCGCCACCGACCGGCTGCGCCGCGAGGCTGTCGGCGCGGCCAAGCTGCGGGAGGTGGCCATGATGTCGAGCCCGCGCGAGGCCGGCGACGACGAGGTCGCGGTCAACGGCGTGCGGGACGACCTGCTGCGGTTGATGTTCACCTGCTGCCATCCGGCGCTGGCGTTCGAGTCCCAGGTAGCGCTCACCCTGCGCACGTTGGCTGGCCTGACCACTGCCGAGATCGGCCGGGCGTTCCTCGTGCCGGAGTCGACGATGTCGAAGCGGCTGGTCCGGGCTAAGCAGAAAATCATCGGCGCCGGCATCCCGTACCGGGTGCCGCCTGCGCACCTGTTGCCGGAGCGCACGACCGCTGTGCTGGGAGTGCTGTACCTGCTGTTCAACGAGGGCTACGCCGCCACCGCGGGCGCCGACCTGATGCGTCACGGCCTGTGCGGCGAGGCGATCCGGCTGGCCCGCACGCTCGCGGGGTTGATGCCCGACGAGCCCGAAGCGCTGGGCCTGCTCGCGTTGTTGCTGCTGCACGACGCCCGGCGCGCCACCCGGGTCGACGACGCTGGCGACCTGGTCACGTTGGAGCACCAGGAACGGACGCGCGGGGACACCGCTGAGATTGCCGCCGGCGTCCACGTTCTTGAAACGGCGCTGCGTCGCGGCCGTCCCGGGCCGTACCAGGTACAGGCCGCCATCGCCGCGTGTCACGCCACCGCGACTGAGGCGGCCGACACGGACTGGGCGCAGATCGCCGCCCTGTACGGGGAACTCGCCCGGATGGTGCCGTCGGCGGTGGTGCAGCTCAACCACGCGGTGGCGATCGGGATGGCCGAAGGCCCGGCCGCGGGCCTGGCACTGGTGGAAACACTCGATGCATCCGGGGCGCTTGCCGGCTATCACCTGCTACCGGCCACCCGCGCCGACCTGCTCCGCCGCCTCGACCGCCGAGCCGAGGCGGCTGCCGCCTACCGCCAGGCCCTCGAACTCGCGGCCACCGACGCCGAACGCCGCTACCTCACTCGACGCCTGGCCGAAACCACGAACCAGGACTGA
PROTEIN sequence
Length: 374
VALQRWPRDGIPRRPGAWLTTTARNRATDRLRREAVGAAKLREVAMMSSPREAGDDEVAVNGVRDDLLRLMFTCCHPALAFESQVALTLRTLAGLTTAEIGRAFLVPESTMSKRLVRAKQKIIGAGIPYRVPPAHLLPERTTAVLGVLYLLFNEGYAATAGADLMRHGLCGEAIRLARTLAGLMPDEPEALGLLALLLLHDARRATRVDDAGDLVTLEHQERTRGDTAEIAAGVHVLETALRRGRPGPYQVQAAIAACHATATEAADTDWAQIAALYGELARMVPSAVVQLNHAVAIGMAEGPAAGLALVETLDASGALAGYHLLPATRADLLRRLDRRAEAAAAYRQALELAATDAERRYLTRRLAETTNQD*