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PLM1_60_b1_redo_sep16_scaffold_1570_21

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(15687..17000)

Top 3 Functional Annotations

Value Algorithm Source
Putative integrase/recombinase y4rC Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6N4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 332.0
  • Bit_score: 337
  • Evalue 1.10e-89
Integrase {ECO:0000313|EMBL:KKC01555.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 332.0
  • Bit_score: 356
  • Evalue 4.30e-95
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 334.0
  • Bit_score: 317
  • Evalue 5.80e-84

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Taxonomy

Mycobacterium nebraskense → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
GTGACCGTGAACGCCACCCGGCCCCACGCCGGCAACGTCCGCCAAGCCTTCCGGGCCCTGACCAAGGCATGCCGGCTCCAGGAAGGGAAGGGTAAGAACGAGCCCCGGCTGCACGATCTCAGGCACACCTTTGCCGTGAACACGCTCCTCGACGCCCACCGGGCCGGTGTCGATGTCAACGCACGTATCGCAGCCCTGGCGACGTATCTGGGCCACGTCAGCCCGGCCAGCACCTACTGGTATCTCACAGCCAGCCCGCAGCTCCTGGATGTGGTTAACGACCGGGTCGATGGCCCACCGTCAAGGACGCAGCGGATGAGCACGCTCACCGCGACCCTGCAAACGTTCTTCACGACCTACCTGACCGGGCAGAGGGCCGCCAGCCAGCACACCATCAGCGCCTACCGCGACACCTGGCGGATGCTGCTCACCTACCTGCACGAAACGACCGGCATCAAACCCGCCGACATCGAGGTCGCCGACCTCGGTGTCGAGGCCATCACCGGGTTCCTGCAGTATCTGGAAACCCGGCGGCACAACTGCGTCCGGACCCGCAATGCGAGGCTCGCAGCGATCCACTCCTTCTTCTCCTACGCCGCCTACCGCCACCCCGAGCACGTCGACCTCATCGCCAGAGTGCTGGCCATCCAGACCAAGAAAACGCACACGACGATCTTGACTTACCTCACCGATCCCGAGGTCGACGCCATCCTCAACGGGCCCGACCAGGCAACGCGGACCGGTCGTCGTGACCACGTCATCCTGCTGACACTGATCACCACCGGCCTGCGTGTCGGTGAGCTCATCGCACTGACACAGCAAGATCTTCACCTGGCCAGACCGGCGCACCTGAGGGTCCACGGGAAGGGCCGCAAAGATCGAATCACCCCGCTGAACCCGGCCACCGCCACCGCCCTGCGCCGATGGACCACACAGAACTCCCCACGTCACCCGCACAGCCCGGCCTTCACTGCCCAAGGCCGCACCACGCCGATCAGCACCGACGCCATCGCGGCCAGAATCCGAGTCCACACCACGATCGCAGCCACAACATGTCCGACCCTGGTCGGTAAGAACGTCACCCCACACACACTCCGGCACACAACCGCGATGCGGATGCTCGACGCCGGAATCGACCTCACCACCATCGCGCTCTGGCTCGGCCACGAATCCACCGAGTCCACCCAGCCCTACCTCCACGCCGACCTCGGCATGAAACAACGAGCACTCGACAGACTCACCCCGCCGTCCACGGCCACGACACGACGCTACAGACCCGACGACCAACTGCTCACATTCCTGGAGGCCCTCTAA
PROTEIN sequence
Length: 438
VTVNATRPHAGNVRQAFRALTKACRLQEGKGKNEPRLHDLRHTFAVNTLLDAHRAGVDVNARIAALATYLGHVSPASTYWYLTASPQLLDVVNDRVDGPPSRTQRMSTLTATLQTFFTTYLTGQRAASQHTISAYRDTWRMLLTYLHETTGIKPADIEVADLGVEAITGFLQYLETRRHNCVRTRNARLAAIHSFFSYAAYRHPEHVDLIARVLAIQTKKTHTTILTYLTDPEVDAILNGPDQATRTGRRDHVILLTLITTGLRVGELIALTQQDLHLARPAHLRVHGKGRKDRITPLNPATATALRRWTTQNSPRHPHSPAFTAQGRTTPISTDAIAARIRVHTTIAATTCPTLVGKNVTPHTLRHTTAMRMLDAGIDLTTIALWLGHESTESTQPYLHADLGMKQRALDRLTPPSTATTRRYRPDDQLLTFLEAL*