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PLM1_60_b1_redo_sep16_scaffold_1570_22

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(16997..17563)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein Tax=Magnetospirillum sp. SO-1 RepID=M2ZQ40_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 173.0
  • Bit_score: 145
  • Evalue 4.60e-32
Integrase {ECO:0000313|EMBL:KKC01557.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 188.0
  • Bit_score: 146
  • Evalue 2.90e-32
Putative integrase/recombinase y4rB similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 171.0
  • Bit_score: 124
  • Evalue 3.10e-26

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Taxonomy

Mycobacterium nebraskense → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGCTATCGCCTCAGCCGCCATGACACTCTGATCGGCCAGTTCCTGGACTACCTCGAGCATCAGCACGAGAGCAGGATCAGCGTCGAGCACGCGCTGACGTGGGCATGTCTACCGTCCGGCGCTCGGCCCCGCTGGCACACAGCCAGGCTCGCTGCGATCCGGGGCTTCGCCGCCCACGTCCACACCCACTCCGGTGAGGCCGCCGAGCTGATCCCAGCCGGTATCTTGCCCAGCCGGATCGACCACGCCGTTCCCTACCTTTACACCCCCGCCCAGATCACCGGCCTGATCAACCACGCCTACACGCTGCGGCCGGCAGTGCGTGGGCTCACGCTGGCGACGGTCATCGGGCTGATGGCGGCCACCGGGATGAGGGTCGGTGAGGCTCTCGCCCTGGACACCACCAGCCTCGACGCTGCCGGTGCCACGATCGCGGTGTCGGGCAAGTACGGCAGGAAGCGTCGATTACCGGTGCACTCCTCGACCGCCGCGGCTTTGACCGGCTATCTGCGGACCAGCCGGGGCCTGGTCGATTCGCGCCCGACGATCAGGCGTTGTTCGTGA
PROTEIN sequence
Length: 189
MGYRLSRHDTLIGQFLDYLEHQHESRISVEHALTWACLPSGARPRWHTARLAAIRGFAAHVHTHSGEAAELIPAGILPSRIDHAVPYLYTPAQITGLINHAYTLRPAVRGLTLATVIGLMAATGMRVGEALALDTTSLDAAGATIAVSGKYGRKRRLPVHSSTAAALTGYLRTSRGLVDSRPTIRRCS*