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PLM1_60_b1_redo_sep16_scaffold_1570

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1570_1
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

255..935
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8S526_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL49732.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1570_2
unknown

Not on your lists

1034..1819
DNA (786bp) protein (262aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1570_3
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2557..3651
DNA (1095bp) protein (365aa)
Monooxygenase FAD-binding Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T0Y1_MICAI
monooxygenase
Monooxygenase FAD-binding {ECO:0000313|EMBL:ADL45356.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_1570_4
unknown

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3826..4158
DNA (333bp) protein (111aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1570_5
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4155..4880
DNA (726bp) protein (242aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003728EAA
Uncharacterized protein {ECO:0000313|EMBL:EGX57929.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1570_6
unknown

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4979..5272
DNA (294bp) protein (98aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036C7B5F
PLM1_60_b1_redo_sep16_scaffold_1570_7
unknown

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5272..5415
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1570_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5605..6120
DNA (516bp) protein (172aa)
hypothetical protein Tax=Rhodococcus opacus RepID=UPI00029CCD13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK35129.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM1_60_b1_redo_sep16_scaffold_1570_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6266..6883)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQZ1_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK37013.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_60_b1_redo_sep16_scaffold_1570_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7136..7483
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGB8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28322.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM1_60_b1_redo_sep16_scaffold_1570_11
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7632..8198)
DNA (567bp) protein (189aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003720843
Uncharacterized protein {ECO:0000313|EMBL:EHR52773.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
YceI family protein
PLM1_60_b1_redo_sep16_scaffold_1570_12
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8195..8791)
DNA (597bp) protein (199aa)
riboflavin biosynthesis protein RibD Tax=Amycolatopsis balhimycina RepID=UPI0003780249
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:KJK47693.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
riboflavin biosynthesis protein RibD domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1570_13
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8788..9204)
DNA (417bp) protein (139aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000365A1B2
Glyoxalase I/lactoylglutathione lyase {ECO:0000313|EMBL:EFL08706.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_60_b1_redo_sep16_scaffold_1570_14
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9295..10446
DNA (1152bp) protein (384aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N1S0_9ACTO
DNA-binding protein {ECO:0000313|EMBL:GAM50810.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
LuxR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1570_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10671..11888
DNA (1218bp) protein (406aa)
Probable phage integrase Tax=Rhizobium loti RepID=M5ALS4_RHILI
Probable phage integrase {ECO:0000313|EMBL:BAN09759.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
Putative integrase/recombinase y4rA
PLM1_60_b1_redo_sep16_scaffold_1570_16
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11885..12712
DNA (828bp) protein (276aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000362B625
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ABW09887.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_1570_17
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12752..13972
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003768EEB
Phage integrase family protein {ECO:0000313|EMBL:EUA08606.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
Putative integrase/recombinase y4rA
PLM1_60_b1_redo_sep16_scaffold_1570_18
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13969..14889
DNA (921bp) protein (307aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000379D082
Putative integrase/recombinase y4rB {ECO:0000313|EMBL:CCM63640.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Putative integrase/recombinase y4rB
PLM1_60_b1_redo_sep16_scaffold_1570_19
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14886..15341
DNA (456bp) protein (152aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000376B459
Phage integrase family protein {ECO:0000313|EMBL:ETZ96777.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
phage integrase family protein
PLM1_60_b1_redo_sep16_scaffold_1570_20
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15322..15642
DNA (321bp) protein (107aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003775699
Putative transposase {ECO:0000313|EMBL:GAB98396.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
transposase IS3/IS911 family protein
PLM1_60_b1_redo_sep16_scaffold_1570_21
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(15687..17000)
DNA (1314bp) protein (438aa)
Putative integrase/recombinase y4rC Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6N4_9ACTN
Integrase {ECO:0000313|EMBL:KKC01555.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
integrase family protein
PLM1_60_b1_redo_sep16_scaffold_1570_22
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16997..17563)
DNA (567bp) protein (189aa)
Integrase family protein Tax=Magnetospirillum sp. SO-1 RepID=M2ZQ40_9PROT
Integrase {ECO:0000313|EMBL:KKC01557.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
Putative integrase/recombinase y4rB
PLM1_60_b1_redo_sep16_scaffold_1570_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17538..18539)
DNA (1002bp) protein (334aa)
Phage integrase family protein Tax=Nocardioides sp. CF8 RepID=R7XY57_9ACTO
Phage integrase family protein {ECO:0000313|EMBL:EON24282.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
putative integrase/recombinase
PLM1_60_b1_redo_sep16_scaffold_1570_24
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18737..19003
DNA (267bp) protein (89aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00036E6897
Integrase catalytic region {ECO:0000313|EMBL:EFV90282.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
Integrase catalytic subunit
PLM1_60_b1_redo_sep16_scaffold_1570_25
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19000..19620
DNA (621bp) protein (207aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00036E6897
Integrase catalytic region {ECO:0000313|EMBL:EFV90282.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
Integrase catalytic subunit
PLM1_60_b1_redo_sep16_scaffold_1570_26
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19625..20269
DNA (645bp) protein (215aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003799EEB
Putative integrase/recombinase {ECO:0000313|EMBL:EPR75458.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
integrase family protein
PLM1_60_b1_redo_sep16_scaffold_1570_27
unknown

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comp(20280..20489)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 27 items

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