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PLM1_60_b1_redo_sep16_scaffold_1830_18

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 20205..21632

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MWG4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 443.0
  • Bit_score: 206
  • Evalue 4.20e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 457.0
  • Bit_score: 191
  • Evalue 3.10e-46
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY96843.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 457.0
  • Bit_score: 191
  • Evalue 1.50e-45

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGTTGCCGCCTTAGGGTCCGGCGACGCGCACTCACTGTCCGCCGTCCATGACCGGTACGCCGCGCGCCTGTACGACTACGCGTTCGGGATGCTGCGCGATCGGGAGGCTGCCGAGGACGCCGTCCACGACGCGCTGCTCGTTGCCATCGGTCGCGTCGGCGCTCTCCGCGAACCGCACCGGATCACCGTCTGGCTCTACGCCCTGACCCGCAACGAGTGTCTCCGGCAGTCGCGACGCAGCCGGATGGCGTCCCGGCCCAAGGTCGCCGACTCCCGCGACGAGACGGTGTTCTTCGGCGCGGATCTCCAGGCCGAGCAGGCGCGCGCGCGGATCCGCGACGCCGCCGCCGGCCTCGAACCGCATCGCCGCGAGGCGCTGGATCTGACCGTCCGGCACGGGATCGTCGAGGCCGACCTCGCCACCGTCCTCGGGGTCACCCCGAAGCGCGCCGCCGCGCGGGTCGCCGCCGCCCGGCGTGACCTGGACAAGGCTCTCGACTCGCTGCTCACCGCGCGCGCCGGTCACGGGGCCTGCCCGGAACTCGACGCGCTGCTCGCCGGCTGGGACGGCCTCTTCACCCGTTCGGTGCACGAGCGGGTCAGTGGGCACACGGCCACGTGTCGGACTTGTGCGGGCGCCCCACCGCGCGGCGGCGCGGCCGACCGGTTTGCCGAGTTGCCGCCCGCCCCTGCCCCGGCGCTGCTGCGCAACCGGTTGCTGGGCACTGCCGCCGTCCCGGACCGCGTCGCCTACAGGGGCGATGTCGCCGAGCCGTTCCTGCGGTCGGGGTTCCCGGTGCCGCTGGAAGGGGCCGGCCGTCGCCGCCGCGCGATGATCTGGGCGGCCGTGGCCGTCGTCGTGCTGGCGCTCGTCGGCGGTGCGCTGTACCTGACGCGGTCCGGCGGCGACGCACGCCGGGAGCGGACTGTCGGTAGCTGGACCGGGACCGACCCCGTCGACAGCGGGTCGCCGCACTCCTCCTCAACGGAGGTGACCACGTCGCCGACCGCATCGGGAAGCGCCAGCCCGAACGCGTCACCGAGTGGCACGCCGACGCCGTCCGCGTGGCCGTCGTCAAGGCCCTCGCCGGCGCCCACCCCGACCGGTCCCGGTGCGGGCAGCGATCCCAGTACCAAGGTCAACGCCTTCCTCACGGACGCGACGCTCGGTTGCCCCGAACGGTGGCGCGCGACGGCCACCGGCTACATCCGTGGCAACGAGGTACGCAAGGTCACGTTCTACTGGGGCGAGAGCAGCCCCTCACGGCCCGTCCGGCTGGCGCGGATGGGCGACGGGATCTACCAGGCCGCCGTCGAGGGCCTGCCGATGGACGTGCCGGTCTACTGGCGGGTCGTGGCGATCACCCGTGCAGGCCTCACCTCCTCGACCGGCGTCAAGACGGCTCAGCACCGCCGGCAGTGCTGA
PROTEIN sequence
Length: 476
MVAALGSGDAHSLSAVHDRYAARLYDYAFGMLRDREAAEDAVHDALLVAIGRVGALREPHRITVWLYALTRNECLRQSRRSRMASRPKVADSRDETVFFGADLQAEQARARIRDAAAGLEPHRREALDLTVRHGIVEADLATVLGVTPKRAAARVAAARRDLDKALDSLLTARAGHGACPELDALLAGWDGLFTRSVHERVSGHTATCRTCAGAPPRGGAADRFAELPPAPAPALLRNRLLGTAAVPDRVAYRGDVAEPFLRSGFPVPLEGAGRRRRAMIWAAVAVVVLALVGGALYLTRSGGDARRERTVGSWTGTDPVDSGSPHSSSTEVTTSPTASGSASPNASPSGTPTPSAWPSSRPSPAPTPTGPGAGSDPSTKVNAFLTDATLGCPERWRATATGYIRGNEVRKVTFYWGESSPSRPVRLARMGDGIYQAAVEGLPMDVPVYWRVVAITRAGLTSSTGVKTAQHRRQC*