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PLM3-1_170_b2_sep16_scaffold_19

Search features with annotation key words

Displaying items 61-90 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_19_58
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(47082..47351)
DNA (270bp) protein (90aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_59

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comp(47348..48307)
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM56821.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oxidoreductase domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
oxidoreductase, NAD-binding domain protein
PLM3-1_170_b2_sep16_scaffold_19_60
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(48286..49203)
DNA (918bp) protein (306aa)
branched-chain amino acid aminotransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
branched-chain amino acid aminotransferase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_61

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comp(49240..49842)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK42163.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_19_62
unknown

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50007..50618
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_19_trna_4
unknown

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comp(50632..50705)
DNA (74bp)
transferRNA Pro
PLM3-1_170_b2_sep16_scaffold_19_63
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(50757..51596)
DNA (840bp) protein (280aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUZ7_9ARCH
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:CDI06298.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
oxidoreductase FAD/NAD(P)-binding subunit
PLM3-1_170_b2_sep16_scaffold_19_trna_2
unknown

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51734..51807
DNA (74bp)
transferRNA Ala
PLM3-1_170_b2_sep16_scaffold_19_64
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(51865..52269)
DNA (405bp) protein (135aa)
Putative PKD domain protein Tax=uncultured marine crenarchaeote HF4000_ANIW141N1 RepID=B3T628_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFI17944.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_19_65
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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52325..52609
DNA (285bp) protein (95aa)
DNA/RNA-binding protein Alba Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAC3_9ARCH
albA; DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM3-1_170_b2_sep16_scaffold_19_66
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(52648..53511)
DNA (864bp) protein (288aa)
putative isocitrate lyase/carboxyphosphonoenolpyruvate phosphonomutase (EC:4.1.3.1)
methylisocitrate lyase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_67
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(53545..54054)
DNA (510bp) protein (170aa)
PadR-like family transcriptional regulator bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PadR-like family transcriptional regulator
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_68
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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54158..55867
DNA (1710bp) protein (570aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:CDI06292.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CDI06292.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Succinate dehydrogenase flavoprotein subunit Tax=Thaumarchaeota archaeon N4 RepID=V6AUU4_9ARCH
succinate dehydrogenase or fumarate reductase flavoprotein subunit
PLM3-1_170_b2_sep16_scaffold_19_69
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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55867..56298
DNA (432bp) protein (144aa)
Succinate dehydrogenase, subunit D Tax=Thaumarchaeota archaeon N4 RepID=V6AU60_9ARCH
Succinate dehydrogenase, subunit D {ECO:0000313|EMBL:CDI06291.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
sdhC; putative succinate dehydrogenase/fumarate reductase
PLM3-1_170_b2_sep16_scaffold_19_70
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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56300..56641
DNA (342bp) protein (114aa)
hypothetical protein; K00241 succinate dehydrogenase cytochrome b556 subunit bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_71
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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56643..57413
DNA (771bp) protein (257aa)
sdhB; FeS-center protein of succinate dehydrogenase/fumarate reductase (EC:1.3.5.1)
succinate dehydrogenase and fumarate reductase iron-sulfur protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_72
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(57414..57734)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUZ1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06288.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_19_73
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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57783..59243
DNA (1461bp) protein (487aa)
argH; Argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_74
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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59386..59595
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INT9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14429.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_19_trna_3
unknown

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comp(59822..59895)
DNA (74bp)
transferRNA Lys
PLM3-1_170_b2_sep16_scaffold_19_75
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(60158..60976)
DNA (819bp) protein (273aa)
inositol-phosphate phosphatase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Inositol-phosphate phosphatase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_76
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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61051..62169
DNA (1119bp) protein (373aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_77
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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62175..63335
DNA (1161bp) protein (387aa)
ATPase central domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AAA ATPase central domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_78
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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63347..63649
DNA (303bp) protein (101aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_79
uncultured marine crenarchaeote HF4000_ANIW133M9, Nitrosopumilales, Thaumarchaeota, Archaea

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63670..63855
DNA (186bp) protein (62aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG3H9 RepID=B3T7Q5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ07406.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW133M9.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_19_80
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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63993..65540
DNA (1548bp) protein (516aa)
carboxyl transferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
accB_pccB; acetyl-/propionyl-CoA carboxylase beta chain
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_81
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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65547..67037
DNA (1491bp) protein (497aa)
carbamoyl-phosphate synthase L chain ATP-binding protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
carbamoyl-phosphate synthase L chain ATP-binding protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_82
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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67040..67552
DNA (513bp) protein (171aa)
biotin/lipoyl attachment domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
biotin/lipoyl attachment domain-containing protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_83
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(67572..68045)
DNA (474bp) protein (158aa)
peroxiredoxin bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peroxiredoxin
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_19_84
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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68375..68791
DNA (417bp) protein (139aa)
NADH-ubiquinone oxidoreductase subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 {ECO:0000313|EMBL:EPA04856.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
Displaying items 61-90 of 96 in total

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