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PLM3-1_170_b2_sep16_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_529_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3..188
DNA (186bp) protein (62aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AT37_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05886.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
histidine kinase
PLM3-1_170_b2_sep16_scaffold_529_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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298..3432
DNA (3135bp) protein (1045aa)
peptidase M1 membrane alanine aminopeptidase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peptidase family M1
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3466..3681
DNA (216bp) protein (72aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3747..4094
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ASZ8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05699.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_529_5
unknown

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comp(4228..4350)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_529_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4436..5200
DNA (765bp) protein (255aa)
Transcriptional regulator, ArsR family Tax=Thaumarchaeota archaeon N4 RepID=V6AT95_9ARCH
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDI05643.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ArsR family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_529_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5365..6156
DNA (792bp) protein (264aa)
hypothetical protein; K09807 hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6338..6550
DNA (213bp) protein (71aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6927..7181)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH08_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59140.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_529_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7291..8601
DNA (1311bp) protein (437aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14307.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_529_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8915..9286
DNA (372bp) protein (124aa)
cupin bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cupin domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9322..9738
DNA (417bp) protein (139aa)
DoxX family protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DoxX family protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9742..9912)
DNA (171bp) protein (57aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10116..10796
DNA (681bp) protein (227aa)
Methyltransferase type 11 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU51_9ARCH
Methyltransferase type 11 {ECO:0000313|EMBL:EGP94252.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
type 11 methyltransferase
PLM3-1_170_b2_sep16_scaffold_529_15
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10739..11365)
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFI17825.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
PLM3-1_170_b2_sep16_scaffold_529_16
unknown

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11584..11754
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_529_17
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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11796..12590
DNA (795bp) protein (265aa)
Putative transcriptional regulator, ArsR family Tax=Thaumarchaeota archaeon N4 RepID=V6AQR3_9ARCH
Transcriptional regulator protein-like protein
Transcriptional regulator protein-like protein {ECO:0000313|EMBL:AJW70218.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b2_sep16_scaffold_529_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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12646..13563
DNA (918bp) protein (306aa)
Elongation factor Tu domain 2 protein Tax=Thaumarchaeota archaeon N4 RepID=V6ASR8_9ARCH
Elongation factor Tu domain 2 protein {ECO:0000313|EMBL:CDI05756.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Elongation factor Tu domain 2 protein
PLM3-1_170_b2_sep16_scaffold_529_19

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13611..14168
DNA (558bp) protein (186aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_193_A03.;"
putative aromatic acid decarboxylase (EC:4.1.1.-)
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase Tax=Thaumarchaeota archaeon N4 RepID=V6ASM0_9ARCH
PLM3-1_170_b2_sep16_scaffold_529_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14302..14865
DNA (564bp) protein (188aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_21

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comp(14871..15257)
DNA (387bp) protein (129aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_ANIW93E5 RepID=B3T2Q2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIE97339.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_98_C07.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_529_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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15397..16563
DNA (1167bp) protein (389aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16604..17548
DNA (945bp) protein (315aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
artG; thaumarchaeosortase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_24
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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17532..18020
DNA (489bp) protein (163aa)
id=4400131 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3-1_170_b2_sep16_scaffold_529_25
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18000..18998)
DNA (999bp) protein (333aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K04479 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
PLM3-1_170_b2_sep16_scaffold_529_26

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19078..19326
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3B0_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE91715.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_14_H02.;"
PLM3-1_170_b2_sep16_scaffold_529_27
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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19339..19629
DNA (291bp) protein (97aa)
Putative DNA-binding protein Alba Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D2Y3_9ARCH
putative DNA-binding protein Alba
Putative DNA-binding protein Alba {ECO:0000313|EMBL:AJW71185.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b2_sep16_scaffold_529_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19631..19864
DNA (234bp) protein (78aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_529_29

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comp(19861..20478)
DNA (618bp) protein (206aa)
Lysine exporter protein LysE-YggA {ECO:0000313|EMBL:KFM16440.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
lysine exporter protein LysE/YggA
lysine exporter protein LysE/YggA bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_529_30
unknown

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comp(20512..20760)
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying items 1-30 of 89 in total

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