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PLM3_127_b2_sep16_scaffold_826

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_826_1
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296..799
DNA (504bp) protein (168aa)
AhpC/TSA-family protein Tax=Bordetella RepID=Q7WB88_BORPA
AhpC/TSA-family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_826_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(961..1338)
DNA (378bp) protein (126aa)
glyoxalase/bleomycin resistance protein/dioxygenase bin=bin7_NC10_sister species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lactoylglutathione lyase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_826_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1340..3319)
DNA (1980bp) protein (660aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C565_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ETW98735.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
PLM3_127_b2_sep16_scaffold_826_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3382..4296)
DNA (915bp) protein (305aa)
Luciferase family protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWZ8_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:ETW97538.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase family protein
PLM3_127_b2_sep16_scaffold_826_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4502..5719)
DNA (1218bp) protein (406aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01364.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
L-carnitine dehydratase/bile acid-inducible protein F bin=bin7_NC10_sister species=Burkholderia sp. RPE64 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
PLM3_127_b2_sep16_scaffold_826_6
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6049..7710
DNA (1662bp) protein (554aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
PAS domain S-box Tax=Desulfovibrio africanus PCS RepID=M5PWB7_DESAF
signal transduction histidine kinase
PLM3_127_b2_sep16_scaffold_826_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

7715..9064
DNA (1350bp) protein (450aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IN11_ANADE
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_826_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9068..10069
DNA (1002bp) protein (334aa)
Adenylate and Guanylate cyclase catalytic domain protein bin=GWF2_Methylomirabilis_70_14 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylyl cyclase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_826_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10056..10724)
DNA (669bp) protein (223aa)
Putative Uncharacterized ABC-type transport system, permease component YbbP bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter permease YbbP
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_826_10
unknown

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10904..11170
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_826_11
unknown

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11213..11593
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_826_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12570..13262)
DNA (693bp) protein (231aa)
ABC efflux transporter, ATPase subunit bin=GWC2_Methylomirabilis_70_16 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
antimicrobial peptide ABC transporter ATPase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_826_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

13288..13911
DNA (624bp) protein (208aa)
Lysophospholipase (EC:3.1.1.5)
Lipolytic enzyme, GDSL family bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_826_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13926..16574)
DNA (2649bp) protein (883aa)
Lytic transglycosylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_826_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16578..19172)
DNA (2595bp) protein (865aa)
uridylyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19214..20302
DNA (1089bp) protein (363aa)
Histidinol-phosphate aminotransferase bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidinol-phosphate aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20356..21225
DNA (870bp) protein (290aa)
Pirin domain protein bin=GWB2_Deltaproteobacteria_65_81 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
pirin
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3_127_b2_sep16_scaffold_826_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21399..22268
DNA (870bp) protein (290aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_826_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22395..23531
DNA (1137bp) protein (379aa)
id=4698146 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23528..24502
DNA (975bp) protein (325aa)
L-aminopeptidase/D-esterase bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S58, DmpA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24539..25591
DNA (1053bp) protein (351aa)
N5,N10-methylenetetrahydromethanopterin reductase protein Tax=uncultured bacterium CSL144 RepID=G4WVR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX08076.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
methylenetetrahydromethanopterin reductase
PLM3_127_b2_sep16_scaffold_826_22
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25659..27023)
DNA (1365bp) protein (455aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2NB00_9ACTO
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM84170.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM3_127_b2_sep16_scaffold_826_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27041..27337
DNA (297bp) protein (99aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27350..27706)
DNA (357bp) protein (119aa)
Peptidase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_826_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27646..29115)
DNA (1470bp) protein (490aa)
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
magnesium-dependent deoxyribonuclease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_26
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29112..29819)
DNA (708bp) protein (236aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI000370C4FB
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EWH13006.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
PLM3_127_b2_sep16_scaffold_826_27
unknown

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29855..30493
DNA (639bp) protein (213aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_826_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(30478..31467)
DNA (990bp) protein (330aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_826_29
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(31730..31951)
DNA (222bp) protein (74aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_826_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(31956..33827)
DNA (1872bp) protein (624aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 68 in total

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