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PLM3_127_b2_sep16_scaffold_60_36

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 37784..38647

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000313|EMBL:KJB90587.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 282.0
  • Bit_score: 427
  • Evalue 1.30e-116
Shikimate dehydrogenase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUC0_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 4.40e-111
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 1.30e-111

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGCAACCGTTACTCAACAATCTTTCCTCGTCGGCCTGATCGGCGCCGGCATTCAGGCCTCCCGCACTCCGGCGATGCACGAGCGCGAGGGAGCCGGGCAGGGGCTGCGCTATCTGTACAAGTTGTTTGATCTCGAGAAGCTCGATCTTGGTGCAGACGCGCTGCCTGAGTTGCTGACTGCGGCGGAGCGCATGGGCTTCGCCGGCCTCAACATCACCCACCCGTGCAAGCAGGCGGTCATTCCGCTCTTGACCGCCCTTTCCGACGATGCGCGCGCATTGGGTGCGGTGAACACCGTGGTACTGCGGGACGGCCAGCGCATCGGCCACAACACCGACTGGTGGGGTTTCGCGGAAAGTTTCCGCCGCGGATTGCCGGACGTGAAGCGGGATCGTGTGGTGCAGCTCGGTGCCGGCGGCGCCGGCGCGGCGGTCGCGCATGCGGCGCTGACGCTGGAAGTCAAGCGGCTCACTGTCTTCGATCTCGATGCCAGCCGCTCGCAACGGCTCGCCGCGGACCTTGCCACCCGATTCGGAAAAGGGCGGGCAATAGCCGGTGTCGATCTTGGCGGCGCGATGGCCGAAACCGATGGGCTGATCCATGCAACACCGACCGGCATGGCGAAGCATCCGGGCCTGCCCGTGCCAGCGAAGTTTCTGCGGCCTGAGCTATGGGTCGCCGAGATCGTGTATTTCCCGCTGGAGACCGAGCTTCTGCGCACCGCGAAAGGCATCGGCTGCCGCACGCTGCACGGCGGCGGCATGGCGGTGTTTCAGGCGGCCGAGGCGTTCCGATTGTTCACCGGCATTGCGCCCGATACGAAAAGAATGCTGCGTCACTTCGCTTCGATGGGGGCGGCCTAG
PROTEIN sequence
Length: 288
MATVTQQSFLVGLIGAGIQASRTPAMHEREGAGQGLRYLYKLFDLEKLDLGADALPELLTAAERMGFAGLNITHPCKQAVIPLLTALSDDARALGAVNTVVLRDGQRIGHNTDWWGFAESFRRGLPDVKRDRVVQLGAGGAGAAVAHAALTLEVKRLTVFDLDASRSQRLAADLATRFGKGRAIAGVDLGGAMAETDGLIHATPTGMAKHPGLPVPAKFLRPELWVAEIVYFPLETELLRTAKGIGCRTLHGGGMAVFQAAEAFRLFTGIAPDTKRMLRHFASMGAA*