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PLM3_127_b2_sep16_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_0_1
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..116
DNA (114bp) protein (38aa)
Transposase IS111A/IS1328/IS1533 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK47_PSEUX
Transposase IS1533 {ECO:0000313|EMBL:ETW24923.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
transposase
PLM3_127_b2_sep16_scaffold_0_2
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134..481)
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C7M2_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIE38668.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
PLM3_127_b2_sep16_scaffold_0_3
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(528..1271)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037030AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI12571.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM3_127_b2_sep16_scaffold_0_4
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1725..2546)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036AA2D8
hypothetical protein
Translation initiation factor IF-2 {ECO:0000313|EMBL:KIH97494.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
PLM3_127_b2_sep16_scaffold_0_5
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2803..3456)
DNA (654bp) protein (218aa)
XRE family transcriptional regulator Tax=Salinispora pacifica RepID=UPI00035FAEB7
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ63820.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

3713..4048
DNA (336bp) protein (112aa)
glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XTI0_MICPN
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_0_7
unknown

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comp(4106..4444)
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_0_8
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4613..6349)
DNA (1737bp) protein (579aa)
Putative membrane protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82R39_STRAW
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:BAC68014.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM3_127_b2_sep16_scaffold_0_9
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6499..7512)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6E5_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96420.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_0_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

7821..10109
DNA (2289bp) protein (763aa)
Serine/threonine protein kinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXG8_RUBXD
serine/threonine protein kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_0_11
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10106..11002
DNA (897bp) protein (299aa)
Beta-mannanase-like protein Tax=Arthrobacter sp. (strain FB24) RepID=A0JT99_ARTS2
Beta-mannanase-like protein
Beta-mannanase-like protein {ECO:0000313|EMBL:ABK02269.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
PLM3_127_b2_sep16_scaffold_0_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10968..12095)
DNA (1128bp) protein (376aa)
Beta-mannanase-like protein Tax=Micromonospora sp. (strain L5) RepID=E8S165_MICSL
beta-mannanase-like protein
Beta-mannanase-like protein {ECO:0000313|EMBL:ADL47163.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_127_b2_sep16_scaffold_0_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12095..13759)
DNA (1665bp) protein (555aa)
Glycosyl transferase family 2 Tax=Frankia sp. CN3 RepID=G6HA70_9ACTO
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADL47164.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_127_b2_sep16_scaffold_0_14
Streptomyces sp. JS01, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14107..14688
DNA (582bp) protein (194aa)
iron-sulfur cluster assembly protein HesB Tax=Streptomyces sp. CNB091 RepID=UPI0003803FBF
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:KFK89876.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JS01.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14651..15979)
DNA (1329bp) protein (443aa)
Amino acid transporter Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I643_BORPD
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:CAP44265.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
PLM3_127_b2_sep16_scaffold_0_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16073..17017
DNA (945bp) protein (315aa)
Transcriptional regulator, MarR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9C4_CONWI
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB49091.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_127_b2_sep16_scaffold_0_17
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17405..17692
DNA (288bp) protein (96aa)
Methyltransferase type 11 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUF1_KRIFD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADB29469.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_127_b2_sep16_scaffold_0_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17700..19235)
DNA (1536bp) protein (512aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037518D7
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_127_b2_sep16_scaffold_0_19
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

19514..21259
DNA (1746bp) protein (582aa)
Putative histidine protein kinase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CG96_STRBB
putative histidine protein kinase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_0_20
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21658..22266
DNA (609bp) protein (203aa)
transcriptional regulator Tax=Amycolatopsis benzoatilytica RepID=UPI00035D535A
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AGL20445.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_127_b2_sep16_scaffold_0_21
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22338..22556)
DNA (219bp) protein (73aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037F6967
2-phospho-L-lactate guanylyltransferase CofC
Uncharacterized protein {ECO:0000313|EMBL:ABP53733.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM3_127_b2_sep16_scaffold_0_22
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(22793..23428)
DNA (636bp) protein (212aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
2-phospho-L-lactate guanylyltransferase Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_23
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23506..24219
DNA (714bp) protein (238aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035F88DD
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEB43387.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_127_b2_sep16_scaffold_0_24
unknown

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24246..24863
DNA (618bp) protein (206aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_0_25
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24932..26161
DNA (1230bp) protein (410aa)
cystathionine gamma-synthase (EC:2.5.1.48)
cystathionine gamma-synthase Tax=Nonomuraea coxensis RepID=UPI000378228A
Cystathionine gamma-synthase {ECO:0000313|EMBL:AKH81378.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
PLM3_127_b2_sep16_scaffold_0_26
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26235..27329
DNA (1095bp) protein (365aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
D-alanine--D-alanine ligase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5A3_SPHTD
PLM3_127_b2_sep16_scaffold_0_27
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27384..28283
DNA (900bp) protein (300aa)
ATP-dependent Clp protease ATP-binding protein Tax=Actinopolymorpha alba RepID=UPI000364BD43
ATPase AAA
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:GAC57869.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
PLM3_127_b2_sep16_scaffold_0_28
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28270..29487)
DNA (1218bp) protein (406aa)
Aspartate aminotransferase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BQR0_STRBB
Aspartate aminotransferase {ECO:0000313|EMBL:AKH86934.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
aspC1; aspartate aminotransferase
PLM3_127_b2_sep16_scaffold_0_29
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29615..30739
DNA (1125bp) protein (375aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
phosphoserine aminotransferase Tax=Nocardiopsis potens RepID=UPI00036AD967
serC; putative phosphoserine aminotransferase
PLM3_127_b2_sep16_scaffold_0_30
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30915..31148)
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator Tax=Frankia sp. BMG5.12 RepID=UPI0003712484
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFC79561.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
AsnC family transcriptional regulator
Displaying items 1-30 of 256 in total

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